Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01827 ATGATAACCTTGTTGGACCTCTACCATGTTCTCACCGCGGTCGTGCCGCTCTACGTCGCCATGATACTCGCCTACGGTTCCGTCAAGTGGTGGAAGATCTTCACCCCGGACCAATGCTCCGGCATCAACCGCTTTGTCGCTCTCTTCGCGGTTCCCCTACTCTCCTTCCACTTCATCTCCACCAACAATCCCTACGCCATGAACTACAAGTTCATAGCTGCGGATTCTCTCCAGAAAGCCATAGTCCTTGCCGTCCTCTTCGTCTGGTCTAGAACCAGCTCGAGGGGCTCTCTTGAATGGTCCATCACGCTCTTCTCCCTCTCCACGCTCCCTAACACGCTCGTCATGGGTATCCCATTGCTCAAGGGCATGTACGGGGACGCCTCGGGGACCCTCATGGTCCAGATTGTGGTGCTTCAGTGTATCATCTGGTACACTCTCATGCTCTTTTTGTTTGAGTATAGGGGTGCCAAGCTTCTCATAGTGGAGCAGTTTCCCGACACTGCCGGGTCCATTATCTCGTTCAAGGTTGACTCTGATATCTTATCGTTGGACGGGAAGGAACCGCTTCAGACTGAAGCCGAGGTTGGTGACGATGGCAAGCTTCATGTTACTGTCAGGAAGTCTACCAGTTCGCGCTCTGAGATATTCTCGCGGCGCTCGCATGGTCCTAACTCGGTTTCGTTGACTCCGAGGCCTTCCAATTTAACCAATGCGGAGATTTATTCGCTTCAGTCTTCGAGGAATCCGACGCCAAGAGGGTCCAGTTTCAACCACACGGATTTCTACTCGATGGTGAATAATGGGAGGAACGTGAGTCCGAGGCAGAGTAGTTTTGGGGGGGTGCCGTTTGATGAGGAGAGTGGTGTGAAGGTTAATGGGGGTGCCGGAGCATACCCTGCACCTCACAATGCGGGGATTTTTTCTCCGGTGGGGAAGAAGAAGGGTGGTGGTGGTGGTGGAGAAGGTGGAGGGAAGGATCTTCACATGTTTGTGTGGAGTTCGAGTGCTTCTCCGGTGTCGGAGGGTGGGATCCATGTCTTCAGAGGTGGGGAGTATGGAAATGACCAACTTCCTGTTGGTGGGGTGGCTCACCAGAAAGATTATGATGATTTCGGTCACGACGAATTTAGCTTTGGGAACAGAACCGTCGCTAATGGAGTGGAAAAGGAAGGGCCAGTACTTTCGAAGCTTGGCTCAAGTTCGACGGCCGAGCTTCATCCGAAAGCACAGGGTGAATCCAAAGCTACGTCCATGCCACCCACAAGTGTTATGACAAGACTCATTCTGATTATGGTGTGGAGAAAGCTGATCAGAAACCCCAACACATATTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCCGCTATCGTTGCTCGATCCATATCAATTTTATCTGATGCTGGCCTTGGGATGGCAATGTTTAGTCTTGGGTTATTCATGGCATTGCAACCAAAAATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTCCTCACTGGACCTGCTGTCATGGCTGTCGCTTCAATAGTGGTGGGGCTCAGGGGAGTTCTGTTGCACATAGCTATTGTACAGGCTGCTCTGCCTCAAGGGATTGTCCCTTTTGTGTTTGCTAAGGAATACAACGTTCATCCAGACATCCTTAGCACCGGGGTTATATTTGGGATGCTAATCGCTCTTCCTATCACGCTAGTTTACTACATTTTGCTTGGGCTTTGA 1761 0.5077 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIVLAVLFVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGAKLLIVEQFPDTAGSIISFKVDSDILSLDGKEPLQTEAEVGDDGKLHVTVRKSTSSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNNGRNVSPRQSSFGGVPFDEESGVKVNGGAGAYPAPHNAGIFSPVGKKKGGGGGGEGGGKDLHMFVWSSSASPVSEGGIHVFRGGEYGNDQLPVGGVAHQKDYDDFGHDEFSFGNRTVANGVEKEGPVLSKLGSSSTAELHPKAQGESKATSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVARSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01827 586 MobiDBLite consensus disorder prediction 398 419 - -
Vian2g01827 586 NCBIfam auxin efflux carrier 1 586 IPR014024 -
Vian2g01827 586 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 586 - -
Vian2g01827 586 MobiDBLite consensus disorder prediction 213 232 - -
Vian2g01827 586 Pfam Membrane transport protein 9 581 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01827 Vian-Chr2 36818306 36821114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01827 1 577 Organic Solute Cotransporters AT1G73590 65.190 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01827 K13947 - gmx:100820506 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01827 2 36818306 36821114 Vian2g01827 2 36818306 36821114 ECH