Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01826 ATGGCTATGCATAAGATCCTGCAAAGGGGTCGTCCATTCTTCAATTCTCCTCTTAAACTTGCCTCTTCACCTTCTTCAGCTTCTCACACATTCCCCTCTTCTTTTGATGAATCTCTTCATGTTCGGGAAATCACAAACACAAGAGAAGTTAGGAATGAATTTGGCAAATACCATATAAAAGATTCATCTCAATGCCTCAACTGGACTTCAAGGCCATATTACTGTAGTCATGGCTATGTGGTAAATCGTCATTTTGCATCTGATCACAATGATACAAAGGGGTTCTCAAGTAAGCTTCTTAAAACTATTCCATACCATGTAAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAACGAGAAGGCTATTATTCCTACTAATATAAAAGTTGAGTTAATACAACTACTGGTTTCTTCTGGGTTGTCTGTTGTTGAAGCAACAAGTTTTGTCTCACCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTGTTGGCAGCAATTCAAAATGTTGAAGGTGCCAGGTTTCCTGTCTTGACTCCAAACATTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAGTCATTCTCAAAAGCAAATCTAAATTGTGGCATTGAAGATAATCTTGCCCGTTGCCGTGATATTGCTTCAGCTGCTGGAAGTCTCTCGATCCCAGTCCGCGGATATATATCATGTGTTGTGGGATGTCCCCTGGAAGGAAGTATTGCTCCAGAGAAAGTAGCATATGTGGCAAAATCACTGTATGAGATGGGCTGCGCAGAGATTTCACTGGGTGATACAATTGGTGTTGGCACACCTGGTACTGTAATTCCGATGCTTGAAGCTGTACTTGACGTTGTTCCAACTGACATGCTTGCTGTCCATTTTCACGATACTTACGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGTATCAGCACAGTGGATTCATCTGTTGCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGAGTGAAAACAAATGTGGACCTTGGAAGGCTTATGCTAGCTGGGGATTTCATTTGCAAGCATTTAGGACGTGCATCTGGTTCCAAAGCAGCTACTGCTTTGAGTAAAGTTACTAGTCATGCCTCCAAACTATGA 1221 0.4267 MAMHKILQRGRPFFNSPLKLASSPSSASHTFPSSFDESLHVREITNTREVRNEFGKYHIKDSSQCLNWTSRPYYCSHGYVVNRHFASDHNDTKGFSSKLLKTIPYHVKIVEVGARDGLQNEKAIIPTNIKVELIQLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNIKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASAAGSLSIPVRGYISCVVGCPLEGSIAPEKVAYVAKSLYEMGCAEISLGDTIGVGTPGTVIPMLEAVLDVVPTDMLAVHFHDTYGQALSNILISLQMGISTVDSSVAGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGRLMLAGDFICKHLGRASGSKAATALSKVTSHASKL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01826 406 ProSitePatterns Hydroxymethylglutaryl-coenzyme A lyase active site. 333 342 IPR000138 GO:0004419
Vian2g01826 406 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 101 399 - -
Vian2g01826 406 CDD DRE_TIM_HMGL 109 382 - -
Vian2g01826 406 ProSiteProfiles Pyruvate carboxyltransferase domain. 107 374 IPR000891 GO:0003824
Vian2g01826 406 Pfam HMGL-like 107 379 IPR000891 GO:0003824
Vian2g01826 406 SUPERFAMILY Aldolase 102 400 - -
Vian2g01826 406 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 86 400 IPR043594 GO:0016833
Vian2g01826 406 Gene3D Aldolase class I 101 399 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01826 Vian-Chr2 36788983 36797491 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01826 K01640 - gmx:100801507 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01826 2 36788983 36797491 Vian2g01826 2 36788983 36797491 ECH