Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01821 ATGTTTCCCCAGCCATGGTTCTTCATAGCCACAATCATTGCAACTTCACTGCTCATGTCCTCACTGGTAAAGTCATTTCCAGAAGCTGATAAGGTGAAACACTTGCCTGAACAGTCACCTGTTTCCTTCCAACAATTTGCTGGCTATGTACCCGTTGATGACAATGATCAGAGAGCTCTTTTTTACTACTTTGTTGAAGCACAAAGGAACCCTTCTTCGAAGCCTCTAGTTCTCTGGCTCAATGGAGGGCCTGGCTGCACATCTGTTGGAATTGGAGCCTTCACCGAACATGGTCCTTTTGTTACAAATCAAGGAAAGGCTATTCAAAAAAATCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACCTGGACTCACCAGCAGGTGTTGGATTCTCTTACTCTCTCAATTTGTCATTTTATAAAGCTCTGAACGATGAAGTAACAGCCCGAGACAGTCTAGTTTTCCTGCAGCGCTGGTTTGCCAAGTTCCCAGAATACACAAACAGGGACTTTTATATAATGGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTGGCTGAACTCATTATTAAGAGTAAATTAAATTTCAACCTAAAGGGCATAGCAATAGGAAATCCCCTTCTGGATTTTGACACTGATATGAATGCAGTTGATGAATATTACTGGTCTCATGGAATCATAACTGATCATGCATACAAAATCAAGATCTCTCTGTGTAACTCATCCAGACTATTAAGAGAATACTTCAGTGGCCGTCAACTTTCCAACGATTGTCTTCTTGCAGCTCAAAAAGTCTCAGAAGAATATTCTTTTACATCCTTCATAGATCCATATTACGTCATCGGCGATAGATGTCTTTCTTACAATGTTTCTCAGGCAGCTTTTCTTAAGGAGATGCTAAGTTCAGGGTTGTTTCAGTTTAGGAACTCCCATGATGTGCTTCAAACCCAAAAACCAGACCAGCAAGTTGACGAGTGTAGTATGAAATATTCAGAGAAGTACTTGAACAGGAAAGATGTGCAGAAGGCTCTTCATGCCCGGGTGGTGGGAACTAGCAATTATCGTTTGTGCAGCAGGATTGTACTCACAAATTATGACCCATCCAACAGAGAGATACCGACAATTAATGTTGTCGGCTTCCTTGTAAAATCAGGTCTTCGAGTCATCGTTTACAGTGGGGACCAAGACTCTGTGATTCCATTCATGGGCACCAGAAGATTAGTTGATAAACTTGCAAAGAAAGTTGGCCTTAAAACCACAGTGCCTGGTTTGTGGACAAACAGGTTGGAGGATGGGCACAAGTTTTTGGGAATCACCTCACCTATGCCATGGTGA 1341 0.4191 MFPQPWFFIATIIATSLLMSSLVKSFPEADKVKHLPEQSPVSFQQFAGYVPVDDNDQRALFYYFVEAQRNPSSKPLVLWLNGGPGCTSVGIGAFTEHGPFVTNQGKAIQKNQYSWNKEANILYLDSPAGVGFSYSLNLSFYKALNDEVTARDSLVFLQRWFAKFPEYTNRDFYIMGESYGGHYVPQLAELIIKSKLNFNLKGIAIGNPLLDFDTDMNAVDEYYWSHGIITDHAYKIKISLCNSSRLLREYFSGRQLSNDCLLAAQKVSEEYSFTSFIDPYYVIGDRCLSYNVSQAAFLKEMLSSGLFQFRNSHDVLQTQKPDQQVDECSMKYSEKYLNRKDVQKALHARVVGTSNYRLCSRIVLTNYDPSNREIPTINVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVDKLAKKVGLKTTVPGLWTNRLEDGHKFLGITSPMPW 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01821 446 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Vian2g01821 446 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 411 IPR001563 GO:0004185|GO:0006508
Vian2g01821 446 SUPERFAMILY alpha/beta-Hydrolases 22 424 IPR029058 -
Vian2g01821 446 Gene3D alpha/beta hydrolase 22 441 IPR029058 -
Vian2g01821 446 Pfam Serine carboxypeptidase 38 417 IPR001563 GO:0004185|GO:0006508
Vian2g01821 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Vian2g01821 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Vian2g01821 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Vian2g01821 446 FunFam Carboxypeptidase 25 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01821 Vian-Chr2 36737918 36740438 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01821 K16297 - gmx:100819443 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01821 2 36737918 36740438 Vian2g01821 2 36737918 36740438 ECH