Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01816 ATGACAAAGATAAGTCCGGAAGTTGAAATCAAGATGCCAATGGAGGCATTTCCGCCAGTTTCAGCTGACGTGAGCTTTATTTATGATAGTTTTCCAAAGTACAAACTGGGAGCTGATAATCAAATTCTGGAAGAGCCAGTTGAGGAAAACCAAGGTCCTTCATTGAAGGATGTTATTGAACAAGAAGCTTCCAATTTGTCCGACCAACACAAACGGATCTCAGTTCGTGACCTTGCCAGTAAATTTGACAAGAACTTGGCTGCAGCTGCTAAATTGTCTAATGAGGCAAAACTGAGAGACGTTGCATCTTTGGAGGGACATGTTCTTTTGAAAAAACTCAGAGATGCACTAGAATCTTTAAGAGGTCGTTTTGCAGGAAGAAACAAAGAGGATGTGGAGAAAGCTATATCTATGGTGGAAGCTTTAGCAGTTAAGTTGACTCAAAATGAAGGAGAATTGATCCAAGAGAAGTTTGAAGTGAAGAAGCTAGTAAACTTTCTCAAACAGGCTTCTGAAGATGCTAAGAAGTTAGTTAATCAAGAGAAGTCTTTTGCTTGTGCTGAAATAGAAAGCGCAAGGTCAGTGGTGCTCAGAATTGGGGAGGCTCTTGAAGAACAAGAAAAAGCATCCCAAGCTTCAAAACCACAGGATGTGGATGGACTAATAGAAGAGGTTCAAGAGGCTAGAAGAATCAAACTGTTACATCAGCCAAGCAAGGTGATGGCCATGGAATATGAATTACGTGCTCTTAGGGACCAAATTCGAGAGAAATCTATATTTTCAATTAAGCTTCAGAAAGAGCTTACCATGAGCAAGAGGGACGAGGAAAATAAATCTCGCCTATACATGTTAAATGGTTCTGAAGCTTTGGGTTCATATCTTCAAGTCCAGCCTTGCTCAGATGAAGTGCCACATGTATCTAAATGTTTGATTCAGTGGTATCGCTTGTCATCTGAAGGGAGCTGGAGGGAAGTTATTTCAGGTGCCATCAAATCAATATATGCTCCTGACCCCTCCGATGCAGGGAGAATCTTACAAGTAGATATTGTCTCCAATGGGAAAAAACTTACACTTACAACTAATCCCATTCAACCTGTTTCAGGACTTGGAAGCCTTGTAGAGTCACTTCTACGAAAATCTAATGCTGATTTTAATGTAGTTATTTCTCAAATGAATGGAAAAGATCACTCATCTCATTCTACTCATTCATTTAATGTGGGGAGGATGAGGATAAAGCTATGCAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGAGTTAGAAGTGATGTCAGTAACGCAGCGAAGGCATTGTTTTGGCAAGCTAGAAAAGGTCTCTCATTTGTATTAACCTTTGAATCAGAGAGAGAAAGAAATGTAGCCATCATGGTTGCCAGGAAATATGCTCTTGATTGCAATGTGGTGCTTGCTGGGCCAGATGATCTAGTGTAG 1473 0.4053 MTKISPEVEIKMPMEAFPPVSADVSFIYDSFPKYKLGADNQILEEPVEENQGPSLKDVIEQEASNLSDQHKRISVRDLASKFDKNLAAAAKLSNEAKLRDVASLEGHVLLKKLRDALESLRGRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACAEIESARSVVLRIGEALEEQEKASQASKPQDVDGLIEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSRLYMLNGSEALGSYLQVQPCSDEVPHVSKCLIQWYRLSSEGSWREVISGAIKSIYAPDPSDAGRILQVDIVSNGKKLTLTTNPIQPVSGLGSLVESLLRKSNADFNVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDVSNAAKALFWQARKGLSFVLTFESERERNVAIMVARKYALDCNVVLAGPDDLV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01816 490 Gene3D - 269 365 - -
Vian2g01816 490 Pfam Ig domain of plant-specific actin-binding protein 282 378 - -
Vian2g01816 490 Gene3D - 366 490 - -
Vian2g01816 490 Pfam Coiled-coil regions of plant-specific actin-binding protein 101 268 IPR032009 -
Vian2g01816 490 Pfam Actin-binding domain of plant-specific actin-binding protein 55 97 IPR032012 GO:0003779
Vian2g01816 490 Gene3D - 101 152 - -
Vian2g01816 490 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 1 488 IPR039640 GO:0003779|GO:0007015|GO:0010119
Vian2g01816 490 Pfam PH domain of plant-specific actin-binding protein 381 488 IPR041144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01816 Vian-Chr2 36565543 36571921 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01816 K26540 - gmx:100816432 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01816 2 36565543 36571921 Vian2g01816 2 36565543 36571921 ECH