Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01810 ATGGATTCCTCTTCTCTCTCCAACGATTCGGTTTCTGGATTCAAAGACAAGGAGTCAATGGTTGACCCCTTTTTAGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTTACCATTTTGCGGATGGAGCTGGACATTCAGAGGTTTATGAATAATGCTGACCAACAGCATTTTGAGTTTCCACATTTCCCTTCTTCCTATCTCAGATTGGCTGCACATCGTGTTGCTCAACACTACAGCATGCAAACAATGGTTCAAGATATTGGCTTAGATGGTCAGGGAAGTAAAATTCTCGTGAGAAAGTTACCAGAGAGCAAGTATCCCATGGTTAAGTTATCTGAAATACCTGCAAAGCAATTGGAAAATGATAAATCTGAGCAGAAAAAATTTGTTATTAGACCTAGGCCTAATAAAAACCGTTTGAATGATGCTAATGGAGTTGGGATGAAAGGAAATCCTGTAAGAAGTGTGGAAGAGAGGAAGGAAGAATATGACAGAGCACGAGCACGTATCTTTAGTGGCTCTAGAATCCCTGACTCTGGTGATATCTCATCCATGGTTCCAATGGATGGGAGGAATTCTTCTACTAGCAAGGATGAGAGTGAAACTAGCAAGAACCCCGTTGCTGCTGATTCAGAAAGATGTATCAGTGTCAGGGATATTTGTGCGAATCGAGTTGCCATATTCAGGGATAGGGAAAAGGACCGTAGTGATCCAGATTATGACCGTAGTTATGGAAGGTATGCCAGGAGTATTCCAACCTCTGCTGTTAACTTGGTGCCATTTAACTTGCTAAAAGTTCAACCTTCATTTGCTCAATATGACGCTACATTTAATCATTTGGGTCAGATGTCACAAACTCAGGCCACACATGGCTATGCTCCTTCCACCCCCATAATGAATCCTTTTGGCACCACAGGATTAAATCAGACACCTACGGACGGTGCTTACATACAGTGGCCTAGTGCTGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCTTTGAGCTTTGACTATTCGCAGAACTATTAG 1068 0.4288 MDSSSLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRLAAHRVAQHYSMQTMVQDIGLDGQGSKILVRKLPESKYPMVKLSEIPAKQLENDKSEQKKFVIRPRPNKNRLNDANGVGMKGNPVRSVEERKEEYDRARARIFSGSRIPDSGDISSMVPMDGRNSSTSKDESETSKNPVAADSERCISVRDICANRVAIFRDREKDRSDPDYDRSYGRYARSIPTSAVNLVPFNLLKVQPSFAQYDATFNHLGQMSQTQATHGYAPSTPIMNPFGTTGLNQTPTDGAYIQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01810 355 SUPERFAMILY R3H domain 8 136 IPR036867 GO:0003676
Vian2g01810 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Vian2g01810 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Vian2g01810 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 6 342 - -
Vian2g01810 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Vian2g01810 355 MobiDBLite consensus disorder prediction 135 160 - -
Vian2g01810 355 Pfam SUZ domain 125 174 IPR024771 -
Vian2g01810 355 Gene3D - 11 135 IPR036867 GO:0003676
Vian2g01810 355 Pfam R3H domain 37 86 IPR001374 GO:0003676
Vian2g01810 355 CDD R3H_encore_like 34 100 - -
Vian2g01810 355 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01810 Vian-Chr2 36487845 36490554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01810 - - gmx:100814835 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01810 2 36487845 36490554 Vian2g01810 2 36487845 36490554 ECH