Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01794 ATGAGATTTATCAAAATGGCTGTGACGATTGACAGACATGAGGGGTTTGGGCCGTTTAGCCGATCCCAGAGATGCAAACTCCAATCTTACGGTCACCTTGATCCGAACGTTGTCGAACATAGCAAAAGTGGTGGTACTTTTTCACACTCCATTGAACTAGCATTTGAAGCCTATAATATTCACCGCAGTTTCTCCACTCCATGCCTCCCCCTGACCACACTGGTAGGGGAAGAGCTCACTTGTCACCCTCCAAGGATTGAGATTGTTCGTGGAAGTGGAGCTCCAGTACATGCTCTAGTTGTTGAGGTTGCCATAGCTTTGGCCTCAGGTATCAAACCAATACCCATCCCGAGTGGCCTAGGTGGTGCCTATGCTTTCCGCAACCAAAATGGCACCAACATCGCTGTAGCAAAGCCAGTAGATGAAGAGCCTTTCGCCTTCAACAACCCAAAAGGCTTAGGGGGTCAAATGCTCGGCCAACCTGGCCTCAAGAAATCTATTCGCATTGGTGAAACTGGTATCCGAGAGTTAGCTGCTTATCTTCTTGATCATGGAGGCCTTGCTGCCGTGCCTCCTACGGCTTTAGTCAAATTTTCTAATGCTGCATTCTTTGTCACTTCCAATGCAGCACCATCTGCTCTTCCAATGCCTAAAGTTGCCTCTCTCCAACGCTTTGTTGGTCATGGTTTTGATGCAGGAGAGTTGGGTCCTTCTTTCTTCTCAGTTGCTTCAGTCCACAACATAGGGATCCTTGACATTAGGATCATGAACCTTGATAGACATGCAGGGAATATGCTTGTGGCCGAGCATGACTCTAACAATGCTAGCTATGGTGGTACTGTTGCTGACCTTGTTCCCATCGACCATGGCTTTTGCCTCCCTGAGTGGCTGGATGATCCATATTTTGAGTGGCTACATTGGCCACAAGCCTCTATTCCTTTCTCTGACTATGAACTTGACTACATTTCCAAACTCGATCCCTTCAAAGATGCAGAGGTTTTAAGAACTACCATTCCTTTACTCGGGGAATCCGCAATACGTGTTCTTATTGTTTGCACCGTTTTATTGAAGCAAGCTGCTGCTGCTGGCCTTTGCCTTGCTGAAATAGGCCAAATGATAACTAGGAAATTTCGTGAAGGTCAAGAGTTACCGAGTGAAATGGAAAACATCTGCTTAAAAGTCAAGGCTAGCATCCACACCAAAAACCGCACAGAACAAGGGTCTAAATGTGAACGTGCTGAAATTTCCTTCGGAGACCTCAACCAAGTCCAGTGGGAAGCGTTCTTGGAGCATTTTGGTGAGCTTTTGCACAGTGTTTTTGAGGACAGGAAGTGCAACGCCAAAAAATTGGAACATCTTGGAAGTTACTGA 1371 0.4646 MRFIKMAVTIDRHEGFGPFSRSQRCKLQSYGHLDPNVVEHSKSGGTFSHSIELAFEAYNIHRSFSTPCLPLTTLVGEELTCHPPRIEIVRGSGAPVHALVVEVAIALASGIKPIPIPSGLGGAYAFRNQNGTNIAVAKPVDEEPFAFNNPKGLGGQMLGQPGLKKSIRIGETGIRELAAYLLDHGGLAAVPPTALVKFSNAAFFVTSNAAPSALPMPKVASLQRFVGHGFDAGELGPSFFSVASVHNIGILDIRIMNLDRHAGNMLVAEHDSNNASYGGTVADLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSDYELDYISKLDPFKDAEVLRTTIPLLGESAIRVLIVCTVLLKQAAAAGLCLAEIGQMITRKFREGQELPSEMENICLKVKASIHTKNRTEQGSKCERAEISFGDLNQVQWEAFLEHFGELLHSVFEDRKCNAKKLEHLGSY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01794 456 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 110 406 IPR000403 -
Vian2g01794 456 Pfam Phosphatidylinositol 3- and 4-kinase 121 369 IPR000403 -
Vian2g01794 456 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 53 449 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01794 Vian-Chr2 36278895 36280265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01794 6 416 Acyl Lipid Metabolism Gene Families AT2G40850 58.034 3.70e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01794 - - gmx:100809677 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01794 2 36278895 36280265 Vian2g01794 2 36278895 36280265 ECH