Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01793 ATGGTGAATCCAGGATTGTTTTCTGGGAATAAGTCCGTGAATTCAGTGAAAGTAAGCTTCCGGATACCGTATTTTACCCAATGGGGTCAGAGCTTGCTGGTGTGTGGCTCTGTTCCAGTGCTTGGTGCCTGGAATGTGAAGAGGGGTGTGTTGCTCAGTGTTGTTCATCAAGGGAGTGAGCTCATCTGGGGTGGAAGCATCACAGTGCCAAGAGGGTTCCAATGCCAGTATAGCTATTATGTTGTAGATGATAAGAAAAATGTACTGAGATGCGAGATGGGGAAGAAGCGCGAACTGATACTACCCGAAGGTGTTCAAAGTGGACAGGAGGTCGAGTTCCGTGATCTTTGGCAGGCTGCCTCAGATTCCCTCCCTTTCAGAAGTGCTTTCAAAGATGTCATTTTTAGGCAAAGCTGGGATTTGAGCGAAGCAACTGTAGGAGACAACCACATTAATTTTGAACCAGAAAGAGAAGCTGTCTTGGTCCAATTCAAAATTTCCTGCCCTAATGTTGAGAAAGACTCATCAATATATGTCATTGGTAGCAACACAAAGTTGGGTCAGTGGAAAGCTGAAAAGGGACTAAAACTCAGCTATTTTGGCGAATCTGTCTGGAAAGCTGAATGTGTGATGCAAAGGAGTGATTTTCCAATAAGATATAGATATGGAAAATATGATAGGAGTGGTAACTTTTCTGTAGAGAGTGGTTCGAACCGAGAAGTTTCTACCAACTCCACAAGGAATGATGTGAAATATATTTTTCTCTCAGATGGCATGCTGCGGGAAACACCTTGGCGTGGTGCTGGCGTAGCTATCCCTATGTTTTCTGTTAGGTCGGAATCTGATCTGGGTGTTGGAGAGTTTCTCGACCTTAAGTTGCTAGTTGACTGGGCTGTAGCATCTGGTTTCCATTTAGTTCAACTTTTACCTATCAATGATACATCTGTGCATGGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCGGTCTTTGCATTGCATCCATTGTACCTAAGAGTACAGGCTCTTTCCAAGAACATACCGGAGGAGATCAAGAAAGAGATTGAAAAGGCCAAACAGCAATTAGATCAGAAGGATGTTGATTATGAAGCTACAATGGCCACTAAACTCTCAATTGCGAAGAAAGTTTTTGCTCAAGAGAAAGATTTGATACTCAATTCAAGTTCCTTCCAGCAGTTCTTTTGTGAGAATGAGGGTTGGTTGAAACCCTATGCTGCTTTCTGTTTCCTGCGAGACTTCTTTGAAACATCAGATCGTAGTCAATGGGGTCGTTTTGCCCATTATTCAGACGATAAGCTAGAAAAGCTTGTATCGAAGGACAGCCTGCACTATGAGATAATTTGCTTCCACTACTATGTTCAATATCATTTACATTTACAATTATCAGAAGCTGCATTGTATGCGAGAAAGAAGGGAGTAATATTAAAGGGAGACCTTCCTATTGGAGTTGACAAAAACAGTGTGGACACCTGGGTCTATCCAAATTTGTTTCGAATGAACACTTCTACCGGAGCACCTCCAGATTATTTTGATAAAAATGGCCAGAATTGGGGTTTCCCTACTTATAATTGGGAAGAAATGTCAAAGGACAATTATGGCTGGTGGCGAGGTCGATTGACGCAGATGGCAAAATATTTTACGGCTTACAGGATTGATCACATATTGGGATTCTTTCGAATATGGGAACTTCCGGATCATGCTATGACTGGTCTAGTTGGAAAATTCCGGCCATCTATACCTCTTAGTCAGGAAGAACTTGAAAGAGAAGGGATATGGGACTTTAATCGCTTGAGTCGCCCATATATTAAGCGGGAACTATTAGAGGAAAAATTTGGAGCTGCTTGGACATTTGTTGCAACAACTTTTCTCAATGAATTCGACAAGAACATCTATGAGTTCAAGGAGGATAGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTGCAGAAAGTTCTGTATTGTTGGAGAGTGAAGAGAAACTGCGGCGCAATCTCTTTGATCTTTCACAGAATATAGTTTTAATCCGTGATCCAGAGAATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTCCAGGATTTGGATGATCATAGCAAGAATGTTCTTAAAAGATTATACAATGACTACTATTTCTGTCGTCAAGAGAATCTTTGGAGGCAAAATGCATTGAAGACCCTGCCTGTACTTCTAAATTCATCAGACATGCTGGCCTGTGGTGAAGATTTAGGCCTCATTCCATCTTGTGTCCATCCTGTTATGCAAGAATTGGGATTAGTTGGGTTGCGCATTCAGCGTATGCCCAGTGAAGCTGATCTGGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTATGTGCCCCATCATGTCATGATTGTTCTACCTTGCGTGCTTGGTGGGAAGAAGATGAAGATAGAAGACTCCGGTTTTTCAAGAATGTGATGGAGTCCAATGAACTGCCGCCAGATCAATGTGTTCCAGAAGTTGCACATTTTATTATAAGGCAACATTTTGAAGCTCCATCAATGTGGGCAATCTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAATATACAACACGCCCTGCAACAGAGGAGACAATCAATGACCCTACAAATCCCAAGCACTATTGGAGATACCGTGTGCATGTGAGTTTGGAATCATTGATTAAGGATATTGACCTTCAAACCAATATCAAAGATCTTGTACGTTGGAGTGGAAGATCACTCCCTAAGGAAGAAGCTTCAGGAGTAGATGCCAGCGTAGTGGCAGCATTGTCAGTAGCAGAAGCTGTTACTGTGTTGTCAGTAGCAGAAGCTGTTTCTGAGAAACAGAAGTTTTCCAGTGCCACGGAAAAGCCTGTTCTTGTCAAATAA 2925 0.4191 MVNPGLFSGNKSVNSVKVSFRIPYFTQWGQSLLVCGSVPVLGAWNVKRGVLLSVVHQGSELIWGGSITVPRGFQCQYSYYVVDDKKNVLRCEMGKKRELILPEGVQSGQEVEFRDLWQAASDSLPFRSAFKDVIFRQSWDLSEATVGDNHINFEPEREAVLVQFKISCPNVEKDSSIYVIGSNTKLGQWKAEKGLKLSYFGESVWKAECVMQRSDFPIRYRYGKYDRSGNFSVESGSNREVSTNSTRNDVKYIFLSDGMLRETPWRGAGVAIPMFSVRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKKEIEKAKQQLDQKDVDYEATMATKLSIAKKVFAQEKDLILNSSSFQQFFCENEGWLKPYAAFCFLRDFFETSDRSQWGRFAHYSDDKLEKLVSKDSLHYEIICFHYYVQYHLHLQLSEAALYARKKGVILKGDLPIGVDKNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRGRLTQMAKYFTAYRIDHILGFFRIWELPDHAMTGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIKRELLEEKFGAAWTFVATTFLNEFDKNIYEFKEDSNTEKKIASKLKTCAESSVLLESEEKLRRNLFDLSQNIVLIRDPENPRKFYPRFNLEDTSSFQDLDDHSKNVLKRLYNDYYFCRQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPSEADLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRFFKNVMESNELPPDQCVPEVAHFIIRQHFEAPSMWAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHVSLESLIKDIDLQTNIKDLVRWSGRSLPKEEASGVDASVVAALSVAEAVTVLSVAEAVSEKQKFSSATEKPVLVK 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01793 974 PANTHER - 13 925 - -
Vian2g01793 974 CDD CBM20_DPE2_repeat2 162 258 IPR034841 GO:2001070
Vian2g01793 974 SUPERFAMILY (Trans)glycosidases 265 918 IPR017853 -
Vian2g01793 974 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Vian2g01793 974 Pfam 4-alpha-glucanotransferase 272 900 IPR003385 GO:0004134|GO:0005975
Vian2g01793 974 SUPERFAMILY Starch-binding domain-like 159 246 IPR013784 GO:0030246
Vian2g01793 974 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 154 267 IPR002044 GO:2001070
Vian2g01793 974 Gene3D Glycosidases 265 596 - -
Vian2g01793 974 Pfam Starch binding domain 160 249 IPR002044 GO:2001070
Vian2g01793 974 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Vian2g01793 974 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Vian2g01793 974 SMART CBM_20_2 159 253 IPR002044 GO:2001070
Vian2g01793 974 Gene3D Immunoglobulins 8 119 IPR013783 -
Vian2g01793 974 Gene3D Immunoglobulins 153 254 IPR013783 -
Vian2g01793 974 SUPERFAMILY Starch-binding domain-like 14 117 IPR013784 GO:0030246
Vian2g01793 974 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Vian2g01793 974 Gene3D Glycosidases 721 925 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01793 16 949 Glycoside Hydrolase AT2G40840 71.734 0.0 1445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01793 K00705 - gmx:100793021 1793.48