Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01790 ATGACAGCTCAGACTCAAGAAGATCTTCTTGCGGCTCTCCTCGAACAGGAAAAGATCCATGATGATGAGCCTTTAGTCGAAGACGATGATGATGAGGAAGATGACGACGAAGTCGAGGATGATGACAATGCTGAAGGTCTAGAGGGTGATGCATCTGGTAGATCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGTGTGACTGTCAAGAAGAGCAAGAATATCCTTTTTGTTATCTCAAAACCGGATGTTTTCAAAAGTCCAACATCTGACACATACATTATATTCGGCGAAGCAAAGATTGAAGACTTGAGTTCACAGCTACAGACTCAGGCAGCAGAACAATTCAAGGCTCCTAATGTGAGCAATGTAGGACTGAAGCCAGAAACCTCTGCTACTGCTCAAGATGATGAAGATGTGGACGAGTCTGGTGTAGATCCCAAGGATATTGAGTTAGTGATGACTCAAGCCGGTGTGGTAAGATCAAGAGCTCTTAAGTCCCTCAAAGCTGCCAATGGCGATATTGTTGCTGCCATTATGGAGCTAACTAATTGA 600 0.445 MTAQTQEDLLAALLEQEKIHDDEPLVEDDDDEEDDDEVEDDDNAEGLEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNVGLKPETSATAQDDEDVDESGVDPKDIELVMTQAGVVRSRALKSLKAANGDIVAAIMELTN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01790 199 Pfam NAC domain 61 116 IPR002715 -
Vian2g01790 199 MobiDBLite consensus disorder prediction 22 46 - -
Vian2g01790 199 CDD NAC_NACA 72 119 - -
Vian2g01790 199 CDD UBA_NAC_euk 162 198 - -
Vian2g01790 199 Gene3D - 160 197 - -
Vian2g01790 199 Pfam HYPK UBA domain 160 198 IPR044034 -
Vian2g01790 199 PIRSF NAC_alpha 26 199 IPR016641 GO:0005854
Vian2g01790 199 MobiDBLite consensus disorder prediction 1 68 - -
Vian2g01790 199 MobiDBLite consensus disorder prediction 47 68 - -
Vian2g01790 199 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 26 198 IPR016641 GO:0005854
Vian2g01790 199 SMART NAC_2 61 117 IPR002715 -
Vian2g01790 199 Gene3D - 67 120 IPR038187 -
Vian2g01790 199 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 68 120 - -
Vian2g01790 199 MobiDBLite consensus disorder prediction 134 162 - -
Vian2g01790 199 ProSiteProfiles NAC A/B domain profile. 58 123 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01790 Vian-Chr2 36211589 36213451 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01790 K03626 - gmx:100791446 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01790 2 36211589 36213451 Vian2g01790 2 36211589 36213451 ECH