Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01787 ATGAATTTCTTGCATAGTCCTAAACACAGGTTCCTCTCACCCTTTACCCTCTTCATCCAACGCCGATGGAAGAAACCCACCGTTTCCGCCCAAACCCGTTTGGAGGACAGAGTACGAGACCCCCACTTCGACAAACTCATGGCTCACCTCAAAAGACTCTACCTTGTCCTCGAAATCCACCACCTCATGTCCACACGCAAGCGCGCTCCCTTCGTCTCCCTCACCCTCATGTCCCGCTGGAGAAACATCCTCGAACTCAATGTCCCTGTGGGCTCCTTCCTCCACAAATACCCTCATGTGTTCCACGTGTTCGTCCATCCTTTCAGGAGGAACACGTGCTGCAGGGTCACGAAAAAGATGAAAGAGTTGATCTTGCTTGAAGGGGTGGTGGTGAGGCTGCAGGAGATGGAGGCTGTGAAGAGGGTGAAGAAGCTGCTGATGATGTCTGTGAATGGCACTCTTCGTTTGCACGCTTTGAGGATGATCAGGAGGGAACTGGGTCTCCCTGAGGATTTCAGAGACTCCATCCTTGGGAAATTCAGTGGGGATTTTAAATTGGTTGGTTTGGAGGTTGTGGAATTGGTTGACTGGGATGCAGAATTGGGATTGGCTGAGGTTGAGAAATGGAGGGAGAGAGAGTACACAGAGAAGTGGTTGAGTGAGTTTGAGACCAAGTTTGCATTTCCCATTGGTTTCCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAGAGGTTGAAGAATTGGCAGAGGCTTTCATACACTAAGCCTTATGAACGGAAGGAGGTTGTTAGGGTGAGGACATGTGGTGGGATTGAACGGTATGAGAAGAGGGTTGTGGCTGTTCTTCATGAGCTATTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAACTGGTTCATTTTCGTAGAGACTTAGGTATTGAAGTTAATGTGCGTGAATTGCTGCTAAGGCACCCTGGTATATTTTACATATCAACTAAAGGGAAGACTCTAATTGTTTTTCTTAGGGAAGCATATCGTAAAGGGGTTTTGATTGAACCGAATCCCGTGTATGAGGCACGTAGGAATATGTTGGATCTTGTTCTGTTAGGTTGTAGGAAAACCAGAAAATTGTTGGTTGGTGATGAGGCTAAGGAAGAGAGTAATGTTGTAGTATGTGAAAGGAATGAGGAAGGTGAAAGACAAGGAGATTGGGTGATTCCTTTCTTGGAGAACTGTGAGGAGAGTAGATCCCCTTGA 1245 0.4691 MNFLHSPKHRFLSPFTLFIQRRWKKPTVSAQTRLEDRVRDPHFDKLMAHLKRLYLVLEIHHLMSTRKRAPFVSLTLMSRWRNILELNVPVGSFLHKYPHVFHVFVHPFRRNTCCRVTKKMKELILLEGVVVRLQEMEAVKRVKKLLMMSVNGTLRLHALRMIRRELGLPEDFRDSILGKFSGDFKLVGLEVVELVDWDAELGLAEVEKWREREYTEKWLSEFETKFAFPIGFPTGFKIERGFRERLKNWQRLSYTKPYERKEVVRVRTCGGIERYEKRVVAVLHELLSLTVEKMVEVDQLVHFRRDLGIEVNVRELLLRHPGIFYISTKGKTLIVFLREAYRKGVLIEPNPVYEARRNMLDLVLLGCRKTRKLLVGDEAKEESNVVVCERNEEGERQGDWVIPFLENCEESRSP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01787 414 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 383 IPR045040 GO:0003723
Vian2g01787 414 Pfam Plant organelle RNA recognition domain 38 367 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01787 Vian-Chr2 36147268 36148512 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01787 - - gmx:100789857 703.36