Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01784 ATGGGTTCATTCAAGGCCTTATGCAATGTTTCTCTGCTCCAATTGTTCATAGTGCTTTGCCTTGTCTTCCCATGCTTTGCTACTGACCTGAGAACAACTCTAGTAGTAGATGCTTCTGATGCAACTGGAAGGCCAATACCAGACACACTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAGCTGGGGGATTATGGGCTGAGCTTGTCAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACATTCCTTCTAATATTGATCCTTGGACAATCATTGGAAATGAATCATCAATAATCGTTGAAACTGATCGTACCTCTTTCTTTGACCGTAACAAGGTTGCACTTCGATTGGAGGTGTTATGTGACAGTGAAGGTGACAACATATGCCCAGATGAAGGTGTTGGTATTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGACATACAAAGTGATCTTCTATGTTCGTTCAACTGAATCACTTAATCTAACAGTTTCCTTGAAAGGATCAAATGGTGTAGGGAACCTGGCTTCATCTGCAATCATGGGTACTGCTGATGATTTTTCAAACTGGACAAAGGTGGAGACTTTATTGGTTGCCAAAGCAACAGATCATAACTCAAGACTTCAATTAGCGACAACCACCAAAGGTGTGATATGGTTAGACCAAGTGTCTGCTATGCCAGTGGATACATATAAGGGACATGGTTTCCGAACTGAACTTTTTGAAATGCTATCAGCTTTGAAACCCAAATTTATCAGATTTCCAGGTGGCTGTTTCGTTGAAGGAGAATGGTTAAGAAATGCATTTCGGTGGAAGGCAACTGTTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTATTGGACTGATGATGGACTTGGCTATTTCGAGTTTCTTCAACTTGCGGAGGACTTGGGTGCTTTACCAATATGGGTATTTAACAATGGTGTCAGCCACAATGATGAAGTTGATACATCTGCGGTTTTACCTCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTCGCAAGAGGTGATCCCACTTCAAAATGGGGTTCTCTTAGAGCTGCTATGGGACACCCTGAGCCATTTGATCTAAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAACCGAAATATCGTGGAAACTACCTGAAATTCTATCATGCAATAAGAACTGCTTATCCTGATATCCAAATTATCTCAAACTGTGATGGTTCTTCTCGGGCTTTAGATCATCCAGCTGATATGTATGATTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAACACATTTGACCGCACATCACGAAATGGTCCAAAGGCTTTTGTAAGTGAATATGCTGTGACTGGAAAAGATGCTGGAACAGGAAGCCTTTTGGCAGCCCTAGCTGAAGCCGGGTTCCTTATTGGACTCGAAAAGAACAGTGATGTCATCGAAATGGTCAGCTACGCTCCACTTTTTGTTAATGCCAATGACAGGAGGTGGAACCCAGATGCAATTGTGTTCAACTCTTATCAGGCTTATGGAACTCCTAGCTATTGGGTGCAATTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTAAGTTCATCACTTCAATCCAATTCTTCCTCCAATTCAGTCCTTGCATCAGCAATAACATTTCAAAGTTCTGTAGATAACAAAAATTATATACGAATAAAGGTTGTGAACTTTGGCACCAGCGCAGTGAACCTGAAGATCTCTATTGATGGACTAGAACCAAATTCATTGCAGTTATCTGGATCAACAAAGACTGTGCTTACATCTGGAAATGTAATGGATGAGAACTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATTAAGAGTGGACTTCAGAATGTTGGGAAGGACCTGAATGTGACAGTCCCTCCACGTTCATTCACATCATTTGACTTGCTGAAAGAATCCAGTAATCTGAAGAGGAAGGGGAGTGGTTCTTCTACGTGGTCTTCTATGTAA 2022 0.4194 MGSFKALCNVSLLQLFIVLCLVFPCFATDLRTTLVVDASDATGRPIPDTLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWTIIGNESSIIVETDRTSFFDRNKVALRLEVLCDSEGDNICPDEGVGIYNPGFWGMNIEQGKTYKVIFYVRSTESLNLTVSLKGSNGVGNLASSAIMGTADDFSNWTKVETLLVAKATDHNSRLQLATTTKGVIWLDQVSAMPVDTYKGHGFRTELFEMLSALKPKFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGVSHNDEVDTSAVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKPKYRGNYLKFYHAIRTAYPDIQIISNCDGSSRALDHPADMYDYHVYTNANDMFSRANTFDRTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIEMVSYAPLFVNANDRRWNPDAIVFNSYQAYGTPSYWVQLFFSESSGATLLSSSLQSNSSSNSVLASAITFQSSVDNKNYIRIKVVNFGTSAVNLKISIDGLEPNSLQLSGSTKTVLTSGNVMDENSFSQPKKVVPIKSGLQNVGKDLNVTVPPRSFTSFDLLKESSNLKRKGSGSSTWSSM 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01784 673 Pfam Alpha-L-arabinofuranosidase C-terminal domain 459 647 IPR010720 GO:0046373|GO:0046556
Vian2g01784 673 Gene3D Glycosidases 215 534 - -
Vian2g01784 673 Gene3D - 535 653 IPR013780 -
Vian2g01784 673 SUPERFAMILY Galactose-binding domain-like 69 231 IPR008979 -
Vian2g01784 673 FunFam Alpha-L-arabinofuranosidase 1 534 654 - -
Vian2g01784 673 FunFam Putative alpha-L-arabinofuranosidase family protein 67 227 - -
Vian2g01784 673 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 3 660 - -
Vian2g01784 673 FunFam Alpha-L-arabinofuranosidase 1 228 534 - -
Vian2g01784 673 SMART alpha_l_af_c 458 647 IPR010720 GO:0046373|GO:0046556
Vian2g01784 673 SUPERFAMILY Glycosyl hydrolase domain 524 651 - -
Vian2g01784 673 SUPERFAMILY (Trans)glycosidases 210 541 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01784 Vian-Chr2 36067849 36074627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01784 1 669 Glycoside Hydrolase AT3G10740 67.899 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01784 K01209 - gmx:100787207 1204.5