Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01773 ATGCAGACCGTGAGAGATACAGACGCATCTTTCTCATCCTATCTCAGACCCGATAACAAGGCAACAATAACTACAGGACCTGTTGAAGACGCCATCTCTGAGCTTAGCATATTCGATGCTCACAAATACTTCAACGATGATGGTAGCAGCAACAACACCAATAACATTCAAAAGGTTAACAACAGCAGAGTCTCTCCCATGGAGCGAATTCCAGAGAGAGGTGATGTCATCGCCACAGAAACCACCAGATACTCCTCTGCTTCATCATCTGTGGACGGCTACGCCCACATCAGAAACTACAGAGCACGCTCATTCCACGCGGCAACTCCAACGGCTTCCTCAGAAGCCAGCTGGAACAGCCAAACGGGGCTGCTGTCTCACCCTCCAGGTGCAATCCCTGTCTCAATGCAAAACCCTAAAAGCCTTCGAAACCCCAAACACTCCAAATCCATTTGGCTCCTTAGGAGAAAATGTCCTTGCACGGGGAAAAAATCAGTTCAAATCAAAGAATCAGCTCAAGAATCCAAATCTCAGATATCACAACAAGAAAGAAATTACGAACATCACAACGTTGCTAATCACATCACACCAAATAAGTGGATTCTGAATGAAACACCAGCATCGCTACCGGTACCGGTAACAGCAACAATTGCGGCAGCGAAATCGCAACGGTTTCACAATTCCAACTCTCACAGAGTTACGAGCTCAGTGAGAGTACCGTTCACCGAGGGATTCACTTTCCCCGTGCTAAACCCTAACAATCCAATAACAAAACTAAAAGTCGCAAACAGCGTCGCAGAGGAAGATCCGCCGCGCGACTCGTTAGAGGTGTTCCGGCCCCCAGACGAGCCATCGCCGAAGCCGCTGAACTTCTCGTTCCCAGCTAAGGCACGCGTCGTCGAAGACGACGCCGCGAGCGACGCGAGCTCCGATCTCTTCGAGATCGAGAGCTTCTCGACCGCGACACAGTCAACGTTCCCCGCGGCGTACCGTCGCAACAGCAGAGACTCGTTCGACGAGGCCTCGGGCTCCACTTCAACCACGGCGTTCTTCTTCGGTCGAAGAAGCGTAGACGAGGGCTCCACGACGCCGACTATAACGGAGTGCTACGAGCCGAGCGAGGCGAGCATCGAGTGGAGCGTGACGACGGCGGAGGGACACGACGAGGCGGTTCCGGGCGTGGAGGAGAAATGGAAGCGTAAAGGAGGAAACGGTTTGTTGGTGAGCTGTCGGTGCGAGAAGGCGGTTAGCGTGGGGCCGCAGCCGGTGAAATGTGGATCAGAGGGACAGAGAGGTGCCACGTCACCATCAGCATCACATGTGAACGCTATCGCGAGTGGGGGTAACAGTAGTAAGATTGGGAGTGTAAATAAGCCACCACTTGCCAGGGCTCACCGCAACGCACCTCGCGTGTCGCTTGCTTTCGCGACATAG 1434 0.5307 MQTVRDTDASFSSYLRPDNKATITTGPVEDAISELSIFDAHKYFNDDGSSNNTNNIQKVNNSRVSPMERIPERGDVIATETTRYSSASSSVDGYAHIRNYRARSFHAATPTASSEASWNSQTGLLSHPPGAIPVSMQNPKSLRNPKHSKSIWLLRRKCPCTGKKSVQIKESAQESKSQISQQERNYEHHNVANHITPNKWILNETPASLPVPVTATIAAAKSQRFHNSNSHRVTSSVRVPFTEGFTFPVLNPNNPITKLKVANSVAEEDPPRDSLEVFRPPDEPSPKPLNFSFPAKARVVEDDAASDASSDLFEIESFSTATQSTFPAAYRRNSRDSFDEASGSTSTTAFFFGRRSVDEGSTTPTITECYEPSEASIEWSVTTAEGHDEAVPGVEEKWKRKGGNGLLVSCRCEKAVSVGPQPVKCGSEGQRGATSPSASHVNAIASGGNSSKIGSVNKPPLARAHRNAPRVSLAFAT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01773 477 MobiDBLite consensus disorder prediction 164 184 - -
Vian2g01773 477 MobiDBLite consensus disorder prediction 166 180 - -
Vian2g01773 477 MobiDBLite consensus disorder prediction 264 290 - -
Vian2g01773 477 MobiDBLite consensus disorder prediction 428 456 - -
Vian2g01773 477 MobiDBLite consensus disorder prediction 425 477 - -
Vian2g01773 477 MobiDBLite consensus disorder prediction 265 280 - -
Vian2g01773 477 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 5 442 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01773 Vian-Chr2 35909061 35910494 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01773 - - gmx:100775429 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01773 2 35909061 35910494 Vian2g01773 2 35909061 35910494 ECH
Vian2g01773 2 35909061 35910494 Vian8g00520 8 8817837 8819048 PCT