Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01750 ATGGAGGAGAATCTAAAGCAGAAATTGCTGAACAGAGCAGTAACCTCAGAGCAAGAAAAAGAAGATGAATCATCGTTGGGGAAGAGGGTGTGGAAAGAGAGCAAAGTGATGTGGATAGTGGCAGGACCAGCCATATTCACTAGGTTCTCATCCTTCGGTCTCAATGTTATAAGTCAAGCTTTTGTTGGTCATATTGGCCCAAGGGAACTTGCTGCTTTTGCCCTTGTCTTCACTGTTCTCATTCGCTTTGCCAATGGTGTTCTGTTAGGAATGGCGAGTGCATTGTCAACACTTTGTGGACAAGCATTTGGGGCAAAAGAATATAGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTGTTCGTGACTGCACTTGTTCTTGTTCCTGTGTTCGTCTTCACAAGCCCAATTTTGATACTTTTAGGCCAAGATGAGAGCATAGCACATGTTGCAGGAACCATTTCTCTCTGGGCAATTCCTGTCATGTTTTCTTTCATTTTCTCTTTCACCACCCAAATGTTTCTGCAATCTCAAAGCAAGAACGTCATCATTGCATTCTTGGCAGCTTTTGCGATAGTGATTCATGTGTTTCTCTCCTGGCTTTTGACAATGAATCTGAAGCTCGGGATTACTGGTGCAATGTTTTCAACAATTTTGGCATACTGGATTCCCAACGTTGGTCAAATCATATTTGTGACATGCGGATGGTGCTCTGATACATGGAAAGGTTTCTCCTTTCTGGCAATTAAAGACCTCTGGCCTGTTGTCAAGATGTCCCTTTCTGCCGGTGCCATGCTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTGTTAACGGGTAACATGGAAAACGCAGAGGTTCAAATCGATGCTCTATCTATATGCATCAACGTCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGTAAGTGTTCGCGTGGCAAACGAGCTTGGAAAAGGAAACTCCAAAGCTGCAATCTTTTCTATAGTTGTGACGGTGCTTACATCCTTTTCAATTGGGTTAATCTTGTTTACAATTTTCTTACTTTTAAGAGAAAAAATAGCCTATGTATTTACAACAAGCGAAGACGTAGCTATTGCTGTTGGGGATTTGTCACCTTTGTTGGCATTTTCTTTGTTACTGAATAGTGTTCAACCAGTGCTCTCAGGGGTTGCTATTGGAGCAGGGTGGCAGAGCACCGTAGCATATGTGAACATAGGATGTTATTACATAATAGGTATTCCTTTTGGAATATTACTTGGTAATGTTTTCCACTTGCAAGTTAAGGGTGTTTGGATAGGAATGTTGTTTGGGACACTAGTTCAAACTATAGTTCTAATTATATTAACCTACAGAACTAATTGGGATGAACAGGTAACGATAGCCCGTATACGAATTAATAGGTGGTCTAAAGTTGAACCTGATCATGAAACAATTAGATCAGATAACTAG 1473 0.4094 MEENLKQKLLNRAVTSEQEKEDESSLGKRVWKESKVMWIVAGPAIFTRFSSFGLNVISQAFVGHIGPRELAAFALVFTVLIRFANGVLLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLFVTALVLVPVFVFTSPILILLGQDESIAHVAGTISLWAIPVMFSFIFSFTTQMFLQSQSKNVIIAFLAAFAIVIHVFLSWLLTMNLKLGITGAMFSTILAYWIPNVGQIIFVTCGWCSDTWKGFSFLAIKDLWPVVKMSLSAGAMLCLELWYNTILVLLTGNMENAEVQIDALSICINVNGWEMMISLGFMAAVSVRVANELGKGNSKAAIFSIVVTVLTSFSIGLILFTIFLLLREKIAYVFTTSEDVAIAVGDLSPLLAFSLLLNSVQPVLSGVAIGAGWQSTVAYVNIGCYYIIGIPFGILLGNVFHLQVKGVWIGMLFGTLVQTIVLIILTYRTNWDEQVTIARIRINRWSKVEPDHETIRSDN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01750 490 CDD MATE_eukaryotic 33 466 IPR045069 GO:0042910|GO:1990961
Vian2g01750 490 NCBIfam MATE family efflux transporter 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01750 490 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01750 490 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01750 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01750 Vian-Chr2 35634175 35636414 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01750 K03327 - gmx:100792122 774.622