Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01749 ATGGAGGGAGATCAACAGCAAAAGTTGTTGATCAAAGAGCAAACATCAGAAGAGGAATCGTCACTGGTGAAGAGGGTGTGGAATGAGAGCAAGTTGATGTGGATAGTGGCAGCACCAGCCATATTCACTAGGTTCTCCACCTTCGGTATCAATGTTATAAGCCAGGCTTTTGTTGGTCATATCGGTTCACGAGAACTCGCTGCTTTTGCTCTTGTTTACACTGTTCTCATACGTTTTGCGAATGGTATTCTGTTGGGAATGGCGAGTGCATTATCAACACTTTGTGGACAAGCATTTGGGGCAAAAGAATATAGTATGATGGGAGTGTATCTTCAGAGATCATGGATAGTGTTATGCTCAACTGCAATCTGTCTTCTTCCGTTGTTCTTCTTCACAGGCCCAATTTTGAGGCTCCTAGGCCAAGATGAGAACATAGCACAAGTTGCGGAAACCATTTCTCTTTTGTCAATTCCTGTCTTATTTGCTTTTATTTTTTCCTTCACCACCCAAATGTTTCTGCAATCTCAAAGCAAGAATGTCCTTATAGCATTCTTGGCAGCTATGTCAATAGCTATTCATGTGTTACTGTCTTGGCTATTGACAATACAATTTAACATTGGAATTGCCGGCGCAATGATTTCAACAAGTGTGGCATTTTGGGTTACTAACATTGGCCAACTAATATTTATTACCTGTGGCTGGTGCTCTGATACATGGAAAGGCTTCTCATTTTTAGCATTTAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTCTCATCTGGGGTCATGTTATGTCTTGAGCTGTGGTACAGCACAATATTGGTTCTTCTGACGGGCAACTTGACAAATGCAGAGGTCCAAATTGATGCTCTATCGATATGCCTCAATATTAGCGGATGGGAATTGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGGAAACGAGCTTGGAAAAGGAAGCTCCAAAGCTGCAAAATTCGCCATACTGGTGTCAGTGCTTACATCCTTAGCCATTGGATTCGTTCTCTTCTTATTCTTCTTATTTTTAAGGGAAAAACTTGCCTACGTATTTACCTCAAGTAAAGAGGTGGCCGATGCTGTCGGTGACTTGTCACCTTTGTTGGCAATCTCCATTCTTCTCAACAGTGTGCAACCTGTACTCTCAGGTGTTGCAGTCGGAGCAGGGTGGCAAAGCTATGTAGCATATGTGAACGTAGGGTGTTATTATGTCATAGGTGTTCCTGTAGGAATGGTGCTTGGTAAAGTTCTCCATTTGGAAGTCAAGGGTATTTGGATCGGAATGTTGTTTGGAACATTTATTCAAACTATAGTGCTAATTATAATCACCTACAAAACTAATTGGGACGACCAGGTAATTAAAGCTCGTAATCGAGTTAGCAAGTGGTCGAAGGTGAATGCTGATCATGAAAGAATTACATCAAACAGTTAG 1461 0.4175 MEGDQQQKLLIKEQTSEEESSLVKRVWNESKLMWIVAAPAIFTRFSTFGINVISQAFVGHIGSRELAAFALVYTVLIRFANGILLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLCSTAICLLPLFFFTGPILRLLGQDENIAQVAETISLLSIPVLFAFIFSFTTQMFLQSQSKNVLIAFLAAMSIAIHVLLSWLLTIQFNIGIAGAMISTSVAFWVTNIGQLIFITCGWCSDTWKGFSFLAFKDLWPVVKLSLSSGVMLCLELWYSTILVLLTGNLTNAEVQIDALSICLNISGWELMISLGFMAAASVRVGNELGKGSSKAAKFAILVSVLTSLAIGFVLFLFFLFLREKLAYVFTSSKEVADAVGDLSPLLAISILLNSVQPVLSGVAVGAGWQSYVAYVNVGCYYVIGVPVGMVLGKVLHLEVKGIWIGMLFGTFIQTIVLIIITYKTNWDDQVIKARNRVSKWSKVNADHERITSNS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01749 486 NCBIfam MATE family efflux transporter 39 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01749 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 458 - -
Vian2g01749 486 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01749 486 Pfam MatE 262 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01749 486 CDD MATE_eukaryotic 29 464 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01749 Vian-Chr2 35619095 35623421 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01749 K03327 - gmx:100789487 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01749 2 35619095 35623421 Vian2g01749 2 35619095 35623421 ECH