Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01744 ATGGAGGGGGATCTAAGGCAGAAGCTGTTGAGCAAAGAGAGAAGAAAAGATGAAGAGGAAGAGGAGTTATCGTTGTGGAAGAGGTTCTGGATTGAGAGCAAGGTGATGTGGATAGTGGCAGCACCAGCCATATGCACCAGGTTCTCCACCTTTGGTCTCAATGTTATAAGCCAATCTTTCGTTGGCCATATTGGCTCAAGGGAATTGGCTGCTTTTGCTCTCGTCTACACCGTTCTCATTAGGTTCGCCAATGGGGTTCTCCTAGGGATGGCGAGTGCATTGTCAACACTTTGTGGGCAAGCATTTGGTGCAAAAGAATACAGCATGATGGGAGTGTATCTCCAAAGATCATGGATAGTTTTGTTCATAACTGCACTGTGTCTTCTTCCGGTATTCGTCTTCACAAGCCCACTTTTAACGCTCTTAGGCCAAGATGAAAGCATAGCACAAGTGGCAGGAATCATTTCTATTTGGTCAATTCCTATCATGTTTGCCTTCATTATCTCATTCACTTGTCAGACTTTCCTGCAATCTCAGAGCAAGAATGTCATCATTGCATTCTTGGCAGCATTCTCGATAGTGATTCATGTGTTTCTCTCCTGGCTTTTGACAATGAACTTCAATTTTGGGCTTCCTGGTGCAATGATTTCAACAATTTTGGCATACTGGATTCCCAACGTTGGTCAACTCATATTTGTCACATGCGGGTGGTGCTCTGATACATGGAAAGGTTTCTCCTTTCTGGCATTCAAAGACCTCTGGCCTGTTGTCAAGATGTCCCTTTCTGCCGGTGCCATGCTATGTCTTGAGCTCTGGTACAACACCATACTAGTTCTTTTGACCGGTAACATGAAAAATGCAGAGGTTGCAATTGATGCTCTATCCATATGTCTCAACATCAATGGATGGGAAATGATGATAGCACTCGGTTTTATGGCTGCAGCAAGTGTTCGAGTAGCAAACGAACTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTCTCAATAGTTGTGTCTGTGCTCACATCATTGGCCATCGGATTCTTTCTGTTCTTATTCTTCTTATTTTTCAGAGAAAGACTAGCTTATATATTTACCACAGATAAAGACGTGGCCGTTGCTGTTGGGGATTTGTCACCTTTGTTATCAATCTCTATTTTACTAAACAGTGTTCAACCTGTACTCTCAGGAGTGGCTATAGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAATCTGGGGTGTTATTACATCATAGGTATTCCTGTAGGTATTGTACTTGGTAACTTTCTCGATCTGCAAGTCAAGGGAATCTGGATTGGAATGTTGTTTGGAACATTCATTCAAACAGTAGTGCTAACTGTAATCACATACAAAACTGATTGGGATGAGCAGGTTACCATTGCTCAAAAGCGTATTAGCAGATGGACGAAGGTGAACGGTGCTGACCAAGAAAATGAAACTGAGAGAACATATGTTAGCTAA 1482 0.4278 MEGDLRQKLLSKERRKDEEEEELSLWKRFWIESKVMWIVAAPAICTRFSTFGLNVISQSFVGHIGSRELAAFALVYTVLIRFANGVLLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLFITALCLLPVFVFTSPLLTLLGQDESIAQVAGIISIWSIPIMFAFIISFTCQTFLQSQSKNVIIAFLAAFSIVIHVFLSWLLTMNFNFGLPGAMISTILAYWIPNVGQLIFVTCGWCSDTWKGFSFLAFKDLWPVVKMSLSAGAMLCLELWYNTILVLLTGNMKNAEVAIDALSICLNINGWEMMIALGFMAAASVRVANELGKGSAKAAKFSIVVSVLTSLAIGFFLFLFFLFFRERLAYIFTTDKDVAVAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNLGCYYIIGIPVGIVLGNFLDLQVKGIWIGMLFGTFIQTVVLTVITYKTDWDEQVTIAQKRISRWTKVNGADQENETERTYVS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01744 493 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Vian2g01744 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 461 - -
Vian2g01744 493 NCBIfam MATE family efflux transporter 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01744 493 Coils Coil 2 22 - -
Vian2g01744 493 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01744 493 Pfam MatE 265 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01744 Vian-Chr2 35550381 35553463 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01744 K03327 - gmx:100796360 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01744 2 35550381 35553463 Vian2g01744 2 35550381 35553463 ECH