Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01741 ATGGAAGAAGAGGTAAAGGAGAAGCTTTTGCATGAGCAAAAGGAGAATTGTTTGGAAGAGGAAGAGTCAGTGGGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGTCCTGCCATATTCACAAGGTTTTCAACTTTTGGGATTGTGGTTGTTACTCAATCCTTCATTGGCCATATTGGTTCAACTGAACTAGCTGCATATGCTCTTGTTATGACTGTTCTAGTCAGGTTTGCAAATGGGGTATTGATTGGCATGGCAAGTGCTTTGGAAACTCTTTGTGGTCAAGCATATGGAGCCAGAAAGTATGACATGCTTGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCATGGCCTCTATATTCCTTCTTCCTATTTACATCTTCACCACCCCTTTGTTGGAGGCTCTAGGCCAAGACAAAACCATTGCTCGAGTTGCTGGAAGCATTTCTCTCTGGTCAATTGGCATCATATTTTCTTTCACTGTGTCATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGAACAAGATCATTGCCTACCTTGCAGCAGTTTCAATTTCATTGCACGTTTTCCTGTCATGGCTTCTAACTGTTCAGTTCAAGTTTGGGCTCAACGGTGCACTCACATCGACACTTTTGGCATATTGGATTCCAAACTTTGGCCAGCTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTTTGGCCTGTTATCAAACTTTCTCTCTCTTCTGGGGCTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTTCTTACAGGCAACATGAAAAATGCAGAAGTTTCCATTGATGCTCTGGCCATATGTCTCAACATCAGTGGATGGGAAATGATGATAGCTCTTGGATTCTTTGCTGCTGCTGGTGTTAGGGTTGCAAACGAGCTTGGAAGAGGGAGTTCAAAGGCTGCAAAATTTTCCATTCTGATAACAGTTCTGACATCATTTGTGATTGGATTCGTTCTATTTTTGATGTTCCTGTTTCTGCGGGAAAGACTTGCTTATATTTTCACTACAGACCCTGAGGTGGCTAATGCAGTTGGTGATTTATCACCATTGCTCTCATTTTCCATCTTGATGAACAGTGTTCAACCTGTGCTCTCTGGAGTTTCTGTTGGAGCTGGGTGGCAAAGCATTGTTGCATATGTAAACATTGGCTGTTATTATCTTATTGGTATTCCTGTTGGAGTGCTTCTTGATCACTTTTTCCATTTGGATGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAGACCGTGATGCTTATTACGATCACATTGAAAACCAACTGGGACAAGCAGGTAGAGCTAGCTCGAAATCGTGTTAACAAATGGACATTGGTGGAGAACGAAGAACCAAACACTAGACCAACCATATCTAGCTAA 1470 0.4204 MEEEVKEKLLHEQKENCLEEEESVGKRVWEESKKMWVVAGPAIFTRFSTFGIVVVTQSFIGHIGSTELAAYALVMTVLVRFANGVLIGMASALETLCGQAYGARKYDMLGVYLQRSWIVLFMASIFLLPIYIFTTPLLEALGQDKTIARVAGSISLWSIGIIFSFTVSFTCQMFLQSQSKNKIIAYLAAVSISLHVFLSWLLTVQFKFGLNGALTSTLLAYWIPNFGQLVFIMTKCPDTWKGFSFLAFKDLWPVIKLSLSSGAMLCLEIWYNTVLILLTGNMKNAEVSIDALAICLNISGWEMMIALGFFAAAGVRVANELGRGSSKAAKFSILITVLTSFVIGFVLFLMFLFLRERLAYIFTTDPEVANAVGDLSPLLSFSILMNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPVGVLLDHFFHLDVKGIWIGMLFGTFVQTVMLITITLKTNWDKQVELARNRVNKWTLVENEEPNTRPTISS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01741 489 CDD MATE_eukaryotic 31 464 IPR045069 GO:0042910|GO:1990961
Vian2g01741 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 459 - -
Vian2g01741 489 Pfam MatE 263 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01741 489 Pfam MatE 41 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian2g01741 489 NCBIfam MATE family efflux transporter 41 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01741 Vian-Chr2 35519440 35522537 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01741 K03327 - gmx:100775619 838.95