Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01740 ATGGCCACTGTTCTCAGAACCCCCACTTTCCGGCCAGCGCCTCCGCCGCGCGCTGCCAAGTCGCCGAAACCCTCGCGAGTCGCCGTTGCCTCGTTCAGACAAAGCGCTACCTGCAAGAGAAAACCCTCGCTCCTCTCCTCCCTGGGGTTCCCTCCTGTTCCCTCTCTGCGGTTCATCAGGTTCGTGCCCTTCGCTTTTGACGGCGACACCGAGGCCCCACAGGTTCAGGAACCGGAGGTTCAGGTTCTGTTTTTCGGTAAGCAATGCTGCCCAGCTGGAATCTATACAGGGTTTAGTGGGTTATGTATGCTGAGGAGTATGGAAGGATTGAGTGAAATTGAAGTTAAGCAGATAATGGCCGGTTCTTCTGGTGCAGACCCTTTAGATGGTGCTGTTGACGTAAAGGACAGTGCAAGTGACAATGAGGGTAGTGATGCTGATGAAGCATCTGCTTCACCTTTTGTATTGTTACTTCAATCATACAAAGAAGCATTGGCTAGTAATGATGAAGTCAAAATTGCGCAGCTGGAATCGTCATTAAAATCCATTGAAGATGAGCAAATAGAACTTGAAGGGAAAATAGCTGCTTTATCTGAAGAGTTGTCAATAGAAAAGGATCGGATTCTAAGGATTAGTGCAGACTTTGACAATTTTCGGAAGAGGACAGAGAGAGATCGCCTTTCCCTGGTCACAAATGCTCAGGGTGAAGTTGTAGAAAGTTTATTGTCTGTATTGGATAATTTTGAGAGAGCAAAAACCCAGATTAAGGTGGAGACAGAGGGAGAGGAGAAAATAGTTAACAGCTATCAAAGTATATATAAACAGTTCAATGAAATTCTAGCTGCCCTTGGAGTTGAACCAGTGGAGACAGTTGGAACACCCTTTGATCCACTGGCACGCAAACCTGTTGGCTCGAAATTCAATCATGTCCTTGATGAACTTTTTCAAACACTTTATCAAGCTTGTTCAGGTTTCCTGAAGACCTTGACACGCTTTTAA 999 0.4615 MATVLRTPTFRPAPPPRAAKSPKPSRVAVASFRQSATCKRKPSLLSSLGFPPVPSLRFIRFVPFAFDGDTEAPQVQEPEVQVLFFGKQCCPAGIYTGFSGLCMLRSMEGLSEIEVKQIMAGSSGADPLDGAVDVKDSASDNEGSDADEASASPFVLLLQSYKEALASNDEVKIAQLESSLKSIEDEQIELEGKIAALSEELSIEKDRILRISADFDNFRKRTERDRLSLVTNAQGEVVESLLSVLDNFERAKTQIKVETEGEEKIVNSYQSIYKQFNEILAALGVEPVETVGTPFDPLARKPVGSKFNHVLDELFQTLYQACSGFLKTLTRF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01740 332 Gene3D - 168 282 IPR013805 -
Vian2g01740 332 MobiDBLite consensus disorder prediction 1 26 - -
Vian2g01740 332 PANTHER GRPE PROTEIN 137 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vian2g01740 332 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 189 284 IPR013805 -
Vian2g01740 332 PRINTS GrpE protein signature 292 307 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vian2g01740 332 PRINTS GrpE protein signature 237 252 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vian2g01740 332 PRINTS GrpE protein signature 209 225 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vian2g01740 332 FunFam GrpE protein homolog 166 282 - -
Vian2g01740 332 Pfam GrpE 181 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Vian2g01740 332 Coils Coil 166 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01740 Vian-Chr2 35496123 35499736 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01740 K03687 - gmx:100820521 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01740 2 35496123 35499736 Vian2g01740 2 35496123 35499736 ECH