Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01739 ATGAAAATGAATAGCAGGAGTAGGTTAATGACCCTTTGGTTTGTGATATCTGTTGCACTTTGTTTCAATGCCAGAAACTCAGTTTCAGCTTCAAAGCAGTGTAATTTCCCTGCAATCTTCAACTTTGGTGACTCCAATTCTGACACTGGAGGCCTCTCTGCTGCCTTTGGACAACCTGGTCCTCCCCAAGGAATGACCTACTTCCACCACCCTGCTGGCCGTTACTGTGATGGCCGTCTCATTGTTGATTTCATAGCTAAGAAGCTGGGTCTGCCTTACTTGAATGCATTTCTTGATTCTGTTGGGTCAAATTATAGCCATGGAGCGAACTTTGCAACTGCTGGATCCACCATTAGACCTCAGAACACAACCCTTCATCAAAGTGGAGGCTTCAGCCCTTTCTCTCTGGACGTTCAATTCAATCAATTCAGTGATTTCCAACGCAGAACCCAAATTTTTCGCAATAAAGGTGGAGTATACGAAACATTGTTACCAAAAGCAGAATACTTTTCTCAAGCATTGTACACGTTTGATATTGGTCAAAATGACTTGGCATCTGGTTACTTCCACAACATGTCCACGGATCAAGTTAGAGCGTATGTTCCAGATGTTTTGGATCAATTCAAGAACGTAATCAAGTATATATATAATCATGGAGGAAGGTCATTTTGGGTTCACAATACGGGTCCTGTTGGTTGTTTGCCATACATTATGGATCTTCACCCAGTGAAACGGTCATTAGTGGACAAAGCAGGATGTGCAACCCCTTATAATGAAGTGGCCAAGTTCTTCAATCGTGAACTGAAAAAGGTTGTGGTTCAACTCAGAAAAGAGCTTCCCCTGGCTGCTATCACTTATGTTGATGTTTACGCTGCGAAGTACTCTCTCATTAGTCATCCGAAGAAGCATGGTTTTGAGGAACCATTGAGAGCATGTTGTGGACATGGTGGAAAGTACAACTACAATTTGCACATGGGGTGTGGTGCTAAGATTAAGCGTGGTGGGAAAGAGATTCTGGTGGCGAAGCCATGCAAGGATCCATCTGTTTGGGTTAATTGGGATGGCGTTCATTACACTCAGGCTGCAAACAAAAGGGTGCTTGAACAGATTGTTGATGGTGCATTTTCTGATCCACCCATTCCTTTGAACATGGCTTGTCATAGGAATCTTTGA 1173 0.4322 MKMNSRSRLMTLWFVISVALCFNARNSVSASKQCNFPAIFNFGDSNSDTGGLSAAFGQPGPPQGMTYFHHPAGRYCDGRLIVDFIAKKLGLPYLNAFLDSVGSNYSHGANFATAGSTIRPQNTTLHQSGGFSPFSLDVQFNQFSDFQRRTQIFRNKGGVYETLLPKAEYFSQALYTFDIGQNDLASGYFHNMSTDQVRAYVPDVLDQFKNVIKYIYNHGGRSFWVHNTGPVGCLPYIMDLHPVKRSLVDKAGCATPYNEVAKFFNRELKKVVVQLRKELPLAAITYVDVYAAKYSLISHPKKHGFEEPLRACCGHGGKYNYNLHMGCGAKIKRGGKEILVAKPCKDPSVWVNWDGVHYTQAANKRVLEQIVDGAFSDPPIPLNMACHRNL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01739 390 Pfam GDSL-like Lipase/Acylhydrolase 39 370 IPR001087 GO:0016788
Vian2g01739 390 CDD SGNH_plant_lipase_like 37 373 IPR035669 -
Vian2g01739 390 SUPERFAMILY SGNH hydrolase 39 371 - -
Vian2g01739 390 Gene3D SGNH hydrolase 23 374 IPR036514 -
Vian2g01739 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 379 - -
Vian2g01739 390 FunFam GDSL esterase/lipase At1g09390 27 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01739 Vian-Chr2 35483680 35487144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01739 37 384 Acyl Lipid Metabolism Gene Families AT4G10950 30.471 2.11e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01739 - - vun:114175123 773.467