Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01738 ATGGAACAGAGCGTTCTGGAATGTCTGGGCGTTGAAATCATCGGCGTGATGAGTCCGGTGTCGATCTGCATGTTCCTGGTGGTTCTTCTGGTCTACGCCCTCTCCTCGCCGTCATCCTCTGCCGCCACCATCACAACCGCCGCCAACCTCGTCTACGCCGAGAATCCCGCCGATAGCCCAGCGGAGAAGTTCGAGGGCGCGCTCCTCAACGCCGTCGTCTTCGTCGGCCTCATCGCGCTCGTCACCTTCCTCCTCGTACTCCTCTACTACTACAACTGTACCGCCTTCCTCCGCCACTACACGCGCTTCTCCGCCTTCTTCGTCCTCGCCTCCATGGGCGGATCCATCCTCCTCTCCCTCCTCCAGCGCTTCTCCATCCCCCTCGACGCGGTATCCTCCTTGCTTCTGCTCTTCAATTTCACCGTCGTCGGAGTACTCTCCGTCTTCGCCGGCGGGATCCCGATTATTCTCCGCCAAGCGTACATGGTCTGCCTCGGGATCATCGTCGCTGCTTGGTTCACCAAATTGCCTGAGTGGACCACGTGGACGCTCCTCGTTGCGCTCGCGCTCTACGATTTGGTGGCCGTTCTCGCCCCCGGAGGCCCGCTCAAGCTCCTCGTCGATTTGGCGTCCACTCGGAACGAGGAGCTGCCGGCGTTGGTCTACGAGGCGCGTCCTACTGTCGCTACCCGAACCCCCGCCGCCCTAGGATTTATGGTCGCCGGGGTTTCGGATTCTGAAGCTTCTAGAATTGAGCTTCAGGTAGTTTCTAGGGATAATGTAAGTAACAATGATGATGATGACGACGACATTGATGCGAATCATGGTGGGAGCGATGAAGGGGAAAGGTCCCCATTGGTTGGTGGAATGAGATTTGGCGAGGTTGTTATTAATGAGGAGATGTCTCCCCTTGTTGAAATGAGTGGGATTGGGGATGGTGAGGACGCCGAGAGGGTGATGAGGGAGATTGGTGGGGAGAGGGGGATTAAGCTTGGCCTTGGGGACTTTGTTTTCTACAGTGTTCTTGTGGGGAGAGCTGCCATGTATGATTTGATGACAGTGTATGCGTGTTACCTTGCCATTATTTCGGGACTGGGGTGCACACTGATATTGTTGTCGGTGTGCCGGCAGGCTCTGCCGGCACTTCCAATTTCGATCGCCCTGGGGGTTCTGTTCTATTTTTTGACGCGGCTGCTGATGGAGCCCTTCATTGTTGGGACTGCCACCAATTTGATGATGTTTTGA 1245 0.5639 MEQSVLECLGVEIIGVMSPVSICMFLVVLLVYALSSPSSSAATITTAANLVYAENPADSPAEKFEGALLNAVVFVGLIALVTFLLVLLYYYNCTAFLRHYTRFSAFFVLASMGGSILLSLLQRFSIPLDAVSSLLLLFNFTVVGVLSVFAGGIPIILRQAYMVCLGIIVAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVDLASTRNEELPALVYEARPTVATRTPAALGFMVAGVSDSEASRIELQVVSRDNVSNNDDDDDDIDANHGGSDEGERSPLVGGMRFGEVVINEEMSPLVEMSGIGDGEDAERVMREIGGERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRQALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01738 414 SMART psh_8 65 400 IPR006639 GO:0004190|GO:0016020
Vian2g01738 414 MobiDBLite consensus disorder prediction 259 287 - -
Vian2g01738 414 Gene3D Presenilin 311 405 IPR042524 -
Vian2g01738 414 FunFam Presenilin 307 405 - -
Vian2g01738 414 Pfam Presenilin 11 404 IPR001108 GO:0004190|GO:0016020|GO:0016485
Vian2g01738 414 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016020|GO:0016485
Vian2g01738 414 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016020|GO:0016485
Vian2g01738 414 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016020|GO:0016485
Vian2g01738 414 PANTHER PRESENILIN 2 414 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01738 Vian-Chr2 35477422 35478666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01738 1 414 Miscellaneous Gene Families AT1G08700 62.637 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01738 K04505 - gmx:100819461 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01738 2 35477422 35478666 Vian2g01738 2 35477422 35478666 ECH