Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01733 ATGAAAATGGCGCTATCTTCTTCATCACCTTGTTGGTGTTCTTCCCCTCCACCGCTTCCTCCCTTCATCCAACGACATCGTTTTGTTCCTCTCAAACCCTACACTCGTTCTCAACCACACCACACCCTCGCCGCCGCCGCCACCAGACCTTCTACTCCGTTAGTGCACTCCACCAGACAAGGGTTTGACACCGTCAACATTGCCGAAGATGTCACTCAGTTGATTGGAAACACGCCAATGGTATACCTGAATAAAGTTACGGAGGGTTGTGTGGCTAACATTGCTGCCAAACTTGAGTCTATGCAACCTTGCCGCAGTGTTAAGGACAGAATTGGCTATAGTATGTTATCCAATGCCGAAGAGATTGGAGCAATTTCTCCCGGGAAGACCGTGTTGGTTGAACCAACTACGGGAAATACAGGACTTGGCATTGCTTTTGTTGCAGCAACAAAAGGGTACAAACTTATAGTCACAATGCCTGCTTCTGTTAATGTTGAGAGGAGAATCCTTTTACGTGCTTTTGGTGCAGAGGTTATTTTGACTGATTCTGAGAAGGGGTTAAAAGGGGCCGTTGACAAAGCTGAAGAAATTGTACGCAGCACACCTGACGCTTACATGTTTCGACAGTTTGATAATGTGACTAATGCCAAGATACACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCCTAGGTAATGTTGACATATTGGTTGCTGGGATTGGAACTGGTGGCACCATTACTGGCACTGGACGTTATCTGAAAATGATGAACCAAAATATAGAGGTGGTTGGGGTGGAACCTGCAGACCGAAGTGTCGTTTCAGGTGACAGTCCTGGTTTCATGCCAAGCATTTTGGATAGCAAACTGCTTGACGAAGTTATCAAGGTTACAAATGTTGAAGCTATTGAAATGGCAAGGAGATTAGCATTGAAAGAAGGTTTGCTGGTTGGGATTTCTTCAGGAGCTGCAGCTGCTGCTGCCATTAAATTAGCAAGACGGCCTGAGAATTCTGGGAAACTCATTGTGATTGAAGCTGCTCTCATGGCACTGCCATTCGAAGAAGTAGCAGCTGTCTCTTGCTTTGTATAG 1095 0.4603 MKMALSSSSPCWCSSPPPLPPFIQRHRFVPLKPYTRSQPHHTLAAAATRPSTPLVHSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMQPCRSVKDRIGYSMLSNAEEIGAISPGKTVLVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRAFGAEVILTDSEKGLKGAVDKAEEIVRSTPDAYMFRQFDNVTNAKIHFETTGPEIWEDTLGNVDILVAGIGTGGTITGTGRYLKMMNQNIEVVGVEPADRSVVSGDSPGFMPSILDSKLLDEVIKVTNVEAIEMARRLALKEGLLVGISSGAAAAAAIKLARRPENSGKLIVIEAALMALPFEEVAAVSCFV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01733 364 CDD CBS_like 76 344 - -
Vian2g01733 364 FunFam Cysteine synthase 201 351 - -
Vian2g01733 364 Gene3D - 109 211 IPR036052 -
Vian2g01733 364 NCBIfam cysteine synthase A 72 345 IPR005859 GO:0004124|GO:0006535
Vian2g01733 364 Pfam Pyridoxal-phosphate dependent enzyme 71 342 IPR001926 -
Vian2g01733 364 NCBIfam cysteine synthase 72 345 IPR005856 GO:0004124|GO:0006535
Vian2g01733 364 Gene3D - 73 345 IPR036052 -
Vian2g01733 364 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 97 115 IPR001216 GO:0006535
Vian2g01733 364 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 67 345 IPR036052 -
Vian2g01733 364 PANTHER CYSTATHIONINE BETA-SYNTHASE 67 345 - -
Vian2g01733 364 FunFam Cysteine synthase 102 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01733 Vian-Chr2 35402016 35405965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01733 63 345 Miscellaneous Gene Families AT3G03630 78.445 8.90e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01733 K22846 - gmx:100819100 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01733 2 35402016 35405965 Vian2g01733 2 35402016 35405965 ECH