Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01727 ATGACCTCAAAGTTGGTTTTGCAGAGAAGGCTCCTCAGGTTTTTGCAACTGTTAGCGCCTTCTTCATCTTCTTCCACTCATGTGGTCCCATTCCTTTCTGTAAAAGCTTCAGAATGCACGTCCCTCTGCAGGAAAAATAGCCTTCTCCCCTCTCACTCATCTTATTCAAGAAATTTGTGCTCTGACAGTTTTAATCTTGATGAATCTCAAGCCCCCCTGACTGTTGATTACCGTTCTCTACTGGATGAGAGTGAATTCCATAGACTGGCTGATTCCACAATACATAGCGTACAAGAGAAATTAGAGGACTATGGAGACTTAGTTGAAGTTGATGGATTTGACATAGATTATGGGAATGATGTTTTGACTGTAAAACTTGGCGATTGTGGCACCTATGTATTGAACAAACAAACACCAAATCGACAACTTTGGCTGTCTTCTCCACTGAGTGGTCCGTCAAGGTTTGATTGGGATCGGGATACCAAGGCTTGGATTTATAGACGGAACAAAGCAAACTTGTACAAAATCTTGGAAGGTGAGTTGGAGCAGTTATGTGGCAAAGCTATCGTTCTTTCCTAA 579 0.4214 MTSKLVLQRRLLRFLQLLAPSSSSSTHVVPFLSVKASECTSLCRKNSLLPSHSSYSRNLCSDSFNLDESQAPLTVDYRSLLDESEFHRLADSTIHSVQEKLEDYGDLVEVDGFDIDYGNDVLTVKLGDCGTYVLNKQTPNRQLWLSSPLSGPSRFDWDRDTKAWIYRRNKANLYKILEGELEQLCGKAIVLS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01727 192 Gene3D Frataxin/CyaY 74 192 IPR036524 GO:0008199|GO:0016226
Vian2g01727 192 ProSiteProfiles Frataxin family profile. 81 189 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 ProSitePatterns Frataxin family signature. 133 147 IPR020895 -
Vian2g01727 192 SUPERFAMILY Frataxin/Nqo15-like 72 188 IPR036524 GO:0008199|GO:0016226
Vian2g01727 192 PANTHER FRATAXIN 37 191 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 Pfam Frataxin-like domain 81 188 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 SMART Frataxin_Cyay_2 81 192 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 CDD Frataxin 81 189 - -
Vian2g01727 192 PRINTS Frataxin signature 81 99 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 PRINTS Frataxin signature 119 134 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 PRINTS Frataxin signature 134 149 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 NCBIfam frataxin 85 182 IPR017789 GO:0004322|GO:0005739|GO:0006879|GO:0018283
Vian2g01727 192 NCBIfam iron donor protein CyaY 82 190 IPR002908 GO:0008199|GO:0016226
Vian2g01727 192 FunFam Frataxin, mitochondrial 74 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01727 K19054 - gmx:100815916 292.352