Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01709 ATGCTAGCATGTCCTAGCAGCTCCCTCCATGGCCTCGCCACGCTGCAACGCCATTCCCAACCATCTCACTTTCTCCTCTCCAATTCTCTCTTCTTCCCTCCCTCCCATCGCCTCGCCGCTTCCCGCAAATGCAACTTCCGCTCGCTTCATTGCGGCAGGAGTAGCTGTCGCTCCGCCTTCAGAGCATCCGCGGACTCGCCGGAGGTGTCGGAGTCCGTCGTAGGCGACAGTGGCGTACTGCAACCGTATTCCGTGAAGATTCCCGTTGGTGATAGACATGTCAGTGTGATTTTGGTTGAGACTGGTCATATAGGAAGACAGGCAAGTGGCTCTGTTACAGTTACAGATGGAGAGACTATCGTGTACACAACTGTTTGCTTGGATGATGTTCCTAGTGAACCATCTGACTTTTTCCCCCTTTCTGTTCATTATCAAGAGCGATTTTCAGCAGCTGGTCGTACTAGTGGAGGGTTTTTTAAGCGAGAAGGAAAGACGAGAGACCATGAGGTTCTTATTTGTAGATTAATTGATAGGCCTCTACCACACCCAAAGGAGGTGGGTTGCATCACATTGCACCTTGGGGTTGCAGTTGTTGCTTGCCGAAAATCACAAGAGATTGTCTTTTCTAGGTCTTTGCTGCGATTTATGTTTAACGTGAGGGACTCAATTCCAGCCCTGAAAATGGTTTTGAGCTATGACGGACTGCACTCCCCTGATTCTTTGGCTGTCACTGCAGCTGGTATAGCAGTTGCACTTTCAGAAGTGCCAATGTCAAAAGCAATTGCTGGGGTTCGTGTTGGTCTTGTTGGTGATAAGTATATAGTAAATCCTACTACCAAGGAGATGGAACACTCTGAATTGGACCTCTTGCTAGCTGGCACAGATAGTGCAATACTGATGATAGAGATTGACGGCGCTTGGCGATTTGGCCGACGAGTCTATCGCCCTTCTTGGTTAAGCGACCATGGAGGGGGTGTTTCATTAGCCCTCGGCTTTGACGATGATGGTGGGCTTCCTAGTAGATTGCTTCACAATTTGAATTAG 1044 0.4904 MLACPSSSLHGLATLQRHSQPSHFLLSNSLFFPPSHRLAASRKCNFRSLHCGRSSCRSAFRASADSPEVSESVVGDSGVLQPYSVKIPVGDRHVSVILVETGHIGRQASGSVTVTDGETIVYTTVCLDDVPSEPSDFFPLSVHYQERFSAAGRTSGGFFKREGKTRDHEVLICRLIDRPLPHPKEVGCITLHLGVAVVACRKSQEIVFSRSLLRFMFNVRDSIPALKMVLSYDGLHSPDSLAVTAAGIAVALSEVPMSKAIAGVRVGLVGDKYIVNPTTKEMEHSELDLLLAGTDSAILMIEIDGAWRFGRRVYRPSWLSDHGGGVSLALGFDDDGGLPSRLLHNLN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01709 347 Gene3D - 70 314 IPR027408 -
Vian2g01709 347 SUPERFAMILY Ribonuclease PH domain 2-like 259 305 IPR036345 -
Vian2g01709 347 Pfam 3' exoribonuclease family, domain 1 98 256 IPR001247 -
Vian2g01709 347 SUPERFAMILY Ribosomal protein S5 domain 2-like 98 256 IPR020568 -
Vian2g01709 347 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 58 180 IPR012162 GO:0003723|GO:0004654|GO:0006402
Vian2g01709 347 Pfam 3' exoribonuclease family, domain 2 260 306 IPR015847 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01709 Vian-Chr2 34947113 34964243 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01709 K00962 - vum:124822443 460.299