Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01705 ATGATCGTGAGGGATGAAAATTCTAGTGTTGGTTTGGGAGGAGGAGGAAAATGGTTTAGGGGTTTTGGAAGCTTGATTAGAAGGAAACAAGTTGATTCTGTTCACGCCAGGAGACATGGTCAATTGGCTAGGAAGTTATCTGCCGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATTGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCCAGAGAGCAAGCAGGACCAGCACTTGTGATATCACTTCTCATTGCAGGAATAGCTGCTGGACTGTCAGCCTTTTGCTATGCAGAGCTTGCATGTAGGTGCCCATCTGCAGGCAGTGCTTATCATTATACATACATATGCATTGGAGAAGGGGTGGCTTGGTTGGTCGGCTGGTCTCTGATTCTAGAATATACAATTGGTGCTTCTGCGGTTGCTCGCGGAATAACACCAAATCTGGCCTTGTTTTTTGGTGGAGAGGAAAACCTACCTTTATTTTTGGCTCGACACACGTTACCAGGTCTTGGAATTGTAGTTGATCCATGTGCAGCTGCATTAATTCTTATTGTTACCGTACTCCTGTGTCTTGGAATCAAGGAGAGTTCAATGGCACAATCTATTGTAACAACAGTAAATGTTGGTGTCATGCTTTTCATCATTTTAGTCGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCTCCAACGGGTATTTTCCGTATGGAGTGAACGGGATGTTTGCTGGGTCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATTCCGTGAGTAGCACAGCTGAGGAGGTGAAAAATCCACAACGAGACCTGCCAATTGGCATATCGACTGCCTTAACTATATGTTGCCTTCTGTATATGCTTGTAGCTGCAGTTATTGTTGGTTTAGTACCATATTATGACTTGAACCCTGATACCCCAATCTCTTCAGCATTTTCTAGTTATGGGATGGAATGGGCAGTGTATATAATAACAACCGGAGCTGTTACTGCTCTTTTTTCCAGTCTGCTGGGTTCTGTTCTTCCTCAGCCACGTGTCTTTATGGCCATGGCTAGGGATGGTTTATTGCCTACTTTCTTCTCAGACATCCATAAAGGCACACAGGTTCCTTTGAAAAGTACCATTGTCACTGGTGTTTTTGCTGCTACTCTTGCATTCTTTATGGATGTTTCCCAGTTAGCAGGAATGGTTAGCGTGGGAACACTGCTTGCATTTACCACAGTTGCAGTTTCAGTTTTGATAATTAGATATGTTCCACCTGATGAAGTACCCATTCCGTCTTCACTTCTATCATCTGTTGATCAATTATTGGGACATTCTGGTGGTCATATTGGGGTAGATAGGGACATAAGTCCTGTAGATCCTGCTAGTTATTATGAGGATAGCCATCTACATGACAAGTCAGAGGCTCTACTTGAACATCCTTTAATAATAAAAGAAGTTACCAAAGATGAACAGAATGAGAAATCTAGGCGAAAACTTGCTGCATGGACCATAGCCTTTCTATGTATAGGGATTCTAATTGTTACCAGTGCTGCTTCAGCTGACTGGTCTCCCAGGATTTTGCAGATAACGGTTTGTGGAATGGGTGTTGTTGTTCTTTTGTGCAGTGTAATTGTACTGGCCTGCATAAAGCAAGATGATAGAAGCCACAACTTTGGACACTCAGGAGGTTTTGCTTGCCCCTGTGTTCCATTCTTGCCTAGTGCATGTATTCTTATAAACACCTACTTACTAATTGATCTGGGAGTTGATACATGGCTACGAGTCTCTGTATGGTTGTTAATAGGAGTACTCATATACTTGTTCTATGGCCGCACTCATAGCTCACTTTTACATGCAATCTATGTTCCCTCAGCGTATGCTGATGAAATCCATCGTTCTCAAGCAATTCATATTGCTTAG 1923 0.4264 MIVRDENSSVGLGGGGKWFRGFGSLIRRKQVDSVHARRHGQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEENLPLFLARHTLPGLGIVVDPCAAALILIVTVLLCLGIKESSMAQSIVTTVNVGVMLFIILVGGYLGFKSGWVGYELSNGYFPYGVNGMFAGSAIVFFSYIGFDSVSSTAEEVKNPQRDLPIGISTALTICCLLYMLVAAVIVGLVPYYDLNPDTPISSAFSSYGMEWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPTFFSDIHKGTQVPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPSSLLSSVDQLLGHSGGHIGVDRDISPVDPASYYEDSHLHDKSEALLEHPLIIKEVTKDEQNEKSRRKLAAWTIAFLCIGILIVTSAASADWSPRILQITVCGMGVVVLLCSVIVLACIKQDDRSHNFGHSGGFACPCVPFLPSACILINTYLLIDLGVDTWLRVSVWLLIGVLIYLFYGRTHSSLLHAIYVPSAYADEIHRSQAIHIA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01705 640 PIRSF AA_transporter 490 624 - -
Vian2g01705 640 PIRSF AA_transporter 23 431 - -
Vian2g01705 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 616 - -
Vian2g01705 640 FunFam probable cationic amino acid transporter 42 434 - -
Vian2g01705 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Vian2g01705 640 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian2g01705 640 Gene3D Amino acid/polyamine transporter I 42 439 - -
Vian2g01705 640 Gene3D Amino acid/polyamine transporter I 486 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01705 Vian-Chr2 34879064 34891187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01705 22 625 Organic Solute Cotransporters AT3G03720 64.745 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01705 K13863 - gmx:100810218 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01705 2 34879064 34891187 Vian2g01705 2 34879064 34891187 ECH