Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01700 ATGTATCTATCCCGCCACATCTTCACCAAACTCTCTCCGCACCGCCGCCACTTCTCCCAATCCGCGGCCGCTGCCGTCCTTCACCCGCCGGAGCCGGAGCCGGAGCCGCTCACCTACCTCGACGGCTTTCCTCGCCCGGATCCCAAGCACGATGAGACGATCTTCGCTGTTCCCCGCGCGGACTCCGGCAAGAACATTTCCGCGAAGGAGCGACGCGTCGGGCGCTTGCCGAGCATCATCTTCGAACAGGAAGATGGCCAGCATGGCGGAAACAAACGCCTCATCTCCGTCCGCACCGACCAGATCAGAAAACTCGTCAACCACCTCGGCCGGTCCTTCTTCCTCTCCCGCCTCTTTCACCTAGAAGTCCGCGCGCAGTTCGACTCTGATGACGTCGTTGAGAGCGTTCGCGTCTTGCCTCGCAATATTCATTTGGAAGCTGGCACAGACGCGCCGTTGACTGTGACCTTTATAAGGGCTCCGTCGCGCGCCTTGTTGAAAGTTAATGTTCCTCTCGTCTTCAGAGGAGATGATGTATCACCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTTAAGTTCTTGTGCCCTGCTGACATTATTCCCCCATATATTGACGTCGATTTAAGTGAGTTGGATGTGGGCCAGAAAATAGTAATGGGAGATCTCAAAGTTCACCCTGCTTTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATAATGGGCCAAAGAGTTTCTGAAATACAAAAGAAATCTAAGTAA 780 0.5256 MYLSRHIFTKLSPHRRHFSQSAAAAVLHPPEPEPEPLTYLDGFPRPDPKHDETIFAVPRADSGKNISAKERRVGRLPSIIFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLEVRAQFDSDDVVESVRVLPRNIHLEAGTDAPLTVTFIRAPSRALLKVNVPLVFRGDDVSPGLKKGASLNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKIVMGDLKVHPALKLLQSKDEAVCKIMGQRVSEIQKKSK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01700 259 Gene3D Ribosomal Protein L25; Chain P 53 160 IPR020056 -
Vian2g01700 259 SUPERFAMILY Ribosomal protein L25-like 58 248 IPR011035 GO:0006412
Vian2g01700 259 Gene3D Ribosomal protein L25, beta domain 165 255 IPR037121 -
Vian2g01700 259 Pfam Ribosomal L25p family 56 157 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vian2g01700 259 FunFam 50S ribosomal protein L25 165 255 - -
Vian2g01700 259 Pfam Ribosomal protein TL5, C-terminal domain 166 248 IPR020057 -
Vian2g01700 259 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 29 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01700 Vian-Chr2 34818735 34821386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01700 K02897 - gmx:100809143 435.261