Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01681 ATGGAAATTCCCAAGCATGCACATGCCAATAGGTCTTATGAAGATTTTGATCCTTTGTTTATGTGGCGTAGAGAAGAGGGTCGTGACACCCTTGAACTTCATCTTCCAGGTTTCAAGAGAGACCAAATACGAATTCAGATAAACCATGTTGGTTTGCTGGTAATATCTGGGGAGCGTCCATCGGAAGGAAACAGATGGAAGCGGTTCAAGAAAGAGTTCGAAATCCCATCATACTGCAACGACGATGCAATCCATGGCAATATGATGCAGAGCATTCTTTCAGTGGTGATGCCAAAGAAAAGCTCTCAGATTCTTCAAGAGGAGCAAGAAATGAAGGAAGAGAAAAGGGGAAACAAGAGAAAAGGAGAGAATGAAATATCAGAAGAAAATGATATGAAAGATCATGCAGAGTACCATTTTGAAGAAGATGATGAGAGGGTTCCGCAGGAAACAACAAGAGATGTTGCCCTAAAGTTCATGCTTGTCATGGTTCTGATATTGGTTGCAGCAAGTTACATATCAGATGTAAGCAAAAGCCTCATGGCTCAAGCTGCTTCGTATTTTCACAACTAG 573 0.4154 MEIPKHAHANRSYEDFDPLFMWRREEGRDTLELHLPGFKRDQIRIQINHVGLLVISGERPSEGNRWKRFKKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSSQILQEEQEMKEEKRGNKRKGENEISEENDMKDHAEYHFEEDDERVPQETTRDVALKFMLVMVLILVAASYISDVSKSLMAQAASYFHN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01681 190 Coils Coil 105 125 - -
Vian2g01681 190 CDD ACD_sHsps-like 30 99 - -
Vian2g01681 190 SUPERFAMILY HSP20-like chaperones 12 102 IPR008978 -
Vian2g01681 190 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 114 IPR002068 -
Vian2g01681 190 PANTHER HEAT SHOCK PROTEIN 26 11 146 - -
Vian2g01681 190 MobiDBLite consensus disorder prediction 109 133 - -
Vian2g01681 190 Gene3D - 1 108 IPR008978 -
Vian2g01681 190 Pfam Hsp20/alpha crystallin family 24 108 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01681 Vian-Chr2 34498272 34499535 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01681 - - pvu:PHAVU_001G113500g 328.176