Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01680 ATGTCTGCAGAACCTCCATCCACTTCGGTGGCCGTCGCAGATGGACAATCCAAGGGTGCCAGAAAACCCAAATATTCTAGATTCTCACAGCAAGAACTGCATGCCTGGCAGCCAATTCTAACACCTAGTTGGGCCATTTCAATATTTACGGTTATAGGACTCATCTTCATTCCGGTTGGTCTTGCTTCACTGTTTGCATCTGAGAGTGTGGTGGAAGTTCCATTCCGATATGATGAAGAATGTCTTCCACCCAATCACAAAAATGACGCAGTGGCATACATTAAAGATGATACGGCAAACAAAACTTGCAATAAGAAATTGACAGTTAAGAGTAAAATGACGGCCCCTGTTTATGTCTATTATCAGCTTGATAATTTTTACCAAAACCATCGCCGATACGTTAAAAGTAGAGATGACAAACAACTAAGGAATAAAGCATCTGAGAATGATGTTGGCAAGTGTAGTCCCGAAGATTATACACCAAATGAAATGGGTCATAAACCAATTGTTCCTTGTGGCCTTATTGCTTGGAGTATGTTTAATGACACGTACAAACTTTCAAGCAACAATAAGGAATTGGTGATTAACAAAAAGAATATAGCATGGAAGAGTGACCAAGATGGGAAATTCGGGTCTGATGTTTATCCAAAGAATTTTCAAGCTGGAGGTTTGAGAGGGGGTGCTAAACTTAATGAGAGCATACCTTGTCTTAGTTCTTCTACTTCTGACATTATGAGAAATGAATCTTTGTCATCATGCGACATGTACCAGCTGAGTGAGCAAGAGGATCTGATTGTTTGGATGAGAACAGCAGCACTACCTACTTTCAGAAAACTATATGGAAAGATTGAGACTGACATAGACGATAATGCAGAAGTGATGCTTGTAATAGAGAACAATTATAATACATACGAGTTTGGAGCCAGAAAGAGCATAGTTCTTTCAACCACGGCTTGGGTTGGTGGAAGAAACCACTTCTTGGGGATGGCATATATTCTCATTGGTGGGATTTCCTTGTTACTGGCTGTGGGTTTCCTACTTCTATATGTGATGCAACCAAGACCTCTCGGAGATCCATCATACTTGTCTTGGAACAGAAATCCTGGATGTCTAAGATGA 1119 0.4057 MSAEPPSTSVAVADGQSKGARKPKYSRFSQQELHAWQPILTPSWAISIFTVIGLIFIPVGLASLFASESVVEVPFRYDEECLPPNHKNDAVAYIKDDTANKTCNKKLTVKSKMTAPVYVYYQLDNFYQNHRRYVKSRDDKQLRNKASENDVGKCSPEDYTPNEMGHKPIVPCGLIAWSMFNDTYKLSSNNKELVINKKNIAWKSDQDGKFGSDVYPKNFQAGGLRGGAKLNESIPCLSSSTSDIMRNESLSSCDMYQLSEQEDLIVWMRTAALPTFRKLYGKIETDIDDNAEVMLVIENNYNTYEFGARKSIVLSTTAWVGGRNHFLGMAYILIGGISLLLAVGFLLLYVMQPRPLGDPSYLSWNRNPGCLR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01680 372 MobiDBLite consensus disorder prediction 138 152 - -
Vian2g01680 372 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 354 IPR005045 GO:0016020
Vian2g01680 372 PIRSF Lem3/Cdc50 3 367 IPR005045 GO:0016020
Vian2g01680 372 PANTHER CELL CYCLE CONTROL PROTEIN 50 19 364 IPR005045 GO:0016020
Vian2g01680 372 MobiDBLite consensus disorder prediction 1 22 - -
Vian2g01680 372 MobiDBLite consensus disorder prediction 138 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01680 Vian-Chr2 34493157 34496575 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01680 K26935 - gmx:100779539 626.32