Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01664 ATGGCCAGCGATCCCAGGCAGAACGAAGCCCAAGTGGCGCTAATTCTCGGCCCGGATTCCACTCATCTTGAATCCCTAATTTCACACTTGATGTCGTCCTCCAACGACCAGCGTTCTCAGGCTGAGTCTCTCTTCAACCTCTGCAAGCAGACCCGCCCGGAATCCCTCCTCCTTGGCCTGGCCCACCTCCTCCACACCGCCCCCAAACCGGAGACCCGAACCATGTCCGCTATCCTCCTCCGCCGCCACCTCACGCGGCACCACGAATCTTTCCTCTGGCCACTCCTCTCCCCGGCCGCCCGCTCCTCCCTCCACTCCGTCCTCCTCTCCTCGCTCCAACAAGAGCCCATCAAATCCATCTCCAAGAAGCTCTGCGACACCATCTCCGAACTCGCCGCCGCAATTCTCCCCGACGACCCCTCCGCCTGGCCCAACCTCCTCCCCCTCCTCTTCCAGTGGGTCACCTCTCCCGAACCCAGGCTCCAGGAAGTCTCCCTCCTGATTTTCGCCCAATTAGCGCACTACATCGGTCAAACCCTACTTCCTCAATTGTCCACTCTCCACTCTGTCTTCCTCCGCTGCCTCCACTCTTCCACCCCCTCCGACGTCCGCATCGCTGCCCTCGCCGCCTCCATCAACTTCATCCAGTGCCTCACTAGTTCCTCTGACCGCGACCGCTTCCAGGACCTCCTTCCTCTCATGATGCAGACGCTCACCGAGGCACTGAATTCCGGCCAGGAGGCCGTCGCGCAGGAGGCGCTCGAACTCCTCATCGAGCTCGCTGGTACTGAGCCGCGGTTCCTCCGGCGCCAGATTGTTGACGTCGTGGGCTCCATGCTGCAAGTTGCGGAAGCCGAGGCCTTGGAGGAAGGGACGCGGCACTTGGCGATTGAGTTTGTTGTAACTCTCGCCGAGGCCAGGGAACGCGCCCCTGGGATGATGAGGAAGTTGCCGCAGTTTGTGAGGAAGCTTTTTGGCGTTTCGCTGAATTTGGTCCTGGATATTGAGGATGATCCTGCATGGCACGCTGCAGTGGACGAGGAAGAGGATGCTGGTGAGACCAGTAACTATGCGTTTGGGCAGGAATGTTTGGATAGGCTTTCGATTGCGCTGGGCGGGAACACCATAGTGCCTGTTGCTTCTGAGTTGTTGCCCACCTACTTGTCTGCTCCTGAGTGGGAAAAGCACCATGCTGCACTCATTGCGCTTGCGCAGATTGCTGAGGGTTGTTCGAAGGTATCATCACTTGCTTTGGTAATGATAAAGAATCTGGAACAGGTGTTATCAATGATTTTAAATTCATTTCATGATCCCCATCCTCGAGTGCGATGGGCAGCTATAAATGCAATTGGGCAGTTGTCCACGGATTTGGGGCCAGATTTGCAGGTTAAATTTCACCACTTAGTTCTTCCGGCTTTGGCTGGTGCAATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCTGTGCTAAATTTCACTGAGAATTGTACCCCTGATATTCTAGCACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCTTGCAGAATGGCAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCCTTAGCATCGGTTGCAGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTGGTTAATGCAAATGATAAATCTAATCGGATGCTTCGAGCCAAAGCTATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGGAAGGAGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAGCAGTCTCAACTGGATGCTGATGATCCAACTGCTAGTTATATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGACAAGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTCTGATCCAATCTGCACAACTTAAGCCTGATGTGACCATTACATCTGCAGATTCTGATACTGAATTTGACGAAGATGATGATAGCATCGAAACAATTACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTCTTGGAGGAGAAGGCTACTGCTTGTAACATGCTATGTTGCTATGCTGACGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCACTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCCATGCCAGAACTGTTATCCTCAGCGAAATCAGCTGTAGAGAAGGGACAATCACAAGGTCGGGATGAGACTTACATAAAGCAGTTGTCTGATTATATAATACCAAGTTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGACGCATTAAATGAATGCATACAGGTCTCTGGACCACATCTAGATGAAAAGCAAGTACGGAGTATTGTTGATGAGATTAAACAAGTCCTTACAGCCAGTTCAACAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGCAAGAAGAGGATCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCCTTCTTGCCGTTCTTTGATGAGCTGTCCTCATACATAACACCTATGTTTGGAAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATCTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAACCGCTCTCAAATATTATGATTCTTTCCTTCCATTCTTACTAGAAGCTTGCAATGATGAATATCCAGATGTTCGACAGGCTGCTGTTTATGGTGTTGGCGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTCGTTGGAGAGGCACTCTCAAGGTTAGATACTGTGATAAGGCATCCAAATGCACAACTTCCTGATAACGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTTCACCGTGATAGCATAAATGCAACCCAGGTTGTTCCTGCCTGGCTGAGTTGCTTGCCTATAAAAGGTGATTTAATCGAGGCTAAGGTTGTGCACGACCAACTTTGTTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTCGCAGTTTTTGCTGAGGTTTTATGTGCGGGAACTGATCTGGCAACTGAACAAACTGTAAGTCGAATGATTAATCTATTGAGGCAGCTACAACAGACTTTACCACCTTCAACCCTTGCTTCAACATGGTCATCCTTGCAGCCTCAGCAGCAACTTGCACTTCAGTCCATCCTCTCATCCTAG 3372 0.4843 MASDPRQNEAQVALILGPDSTHLESLISHLMSSSNDQRSQAESLFNLCKQTRPESLLLGLAHLLHTAPKPETRTMSAILLRRHLTRHHESFLWPLLSPAARSSLHSVLLSSLQQEPIKSISKKLCDTISELAAAILPDDPSAWPNLLPLLFQWVTSPEPRLQEVSLLIFAQLAHYIGQTLLPQLSTLHSVFLRCLHSSTPSDVRIAALAASINFIQCLTSSSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVSLNLVLDIEDDPAWHAAVDEEEDAGETSNYAFGQECLDRLSIALGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSKVSSLALVMIKNLEQVLSMILNSFHDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILAPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLIQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLSDYIIPSLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVLTASSTRKHERAERAKEEDFDAEERELLKEENEQEEDLFDQVGDCLGTLIKTFRTSFLPFFDELSSYITPMFGKDKTSEERRIAICIFDDVAEHCRETALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDTVIRHPNAQLPDNVMAYDNAVSALGKICQFHRDSINATQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEVLCAGTDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01664 1123 SMART TOG_3 370 617 IPR034085 -
Vian2g01664 1123 Pfam Importin repeat 287 378 IPR041653 -
Vian2g01664 1123 SUPERFAMILY ARM repeat 19 834 IPR016024 -
Vian2g01664 1123 SUPERFAMILY ARM repeat 695 1098 IPR016024 -
Vian2g01664 1123 Gene3D - 19 1122 IPR011989 -
Vian2g01664 1123 Pfam Importin repeat 6 792 896 IPR041389 -
Vian2g01664 1123 Pfam HEAT repeats 387 492 - -
Vian2g01664 1123 Pfam HEAT repeat 931 959 IPR000357 GO:0005515
Vian2g01664 1123 Coils Coil 838 858 - -
Vian2g01664 1123 Pfam Interferon-related developmental regulator (IFRD) 496 632 IPR007701 -
Vian2g01664 1123 ProSiteProfiles HEAT repeat profile. 427 465 IPR021133 -
Vian2g01664 1123 PANTHER IMPORTIN BETA 27 1095 IPR040122 GO:0006606
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01664 Vian-Chr2 34302858 34312866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01664 K20222 - gmx:100797431 1975.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01664 2 34302858 34312866 Vian2g01664 2 34302858 34312866 ECH