Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01652 ATGCAATCGCACCTTGTGGTGGGATCCATCTCCATAGGACGCTATGGTGGCGCCGCCGATTCCAGCCCCTTCCACTCCGCCGCACCTTCCTGCTGGACCAACCCTCCTCGCCGGTGCACTCCACTCGTCGTGGCCTCCTCCTCGCCCACTGCCATCAACGGCGGCCAGAATCACTACGCCGTGCTCGGAGTCGCCCGCAATGCCACCGCCGTCGAGATCAAACGCGCTTATCGCCTCCTCGCCCGCAAGTACCATCCCGATGTTAGCAAGGATCCGCATTCTGAGGAGTTATTCAAGAGCATCCGTCACGCATATGAAGTACTATCCAATGAAGCAACTAGAGTTCAGTATGATCAAGAACTTCACTTTAGTCACAACTCTCACAGGGAAAAATGGAGTTACAGTACTGAGTTTGAAGATCAGGTAAGAGTCTATAGATGGGCTCACCTGAGGAAAAAAATGCATAGTGAAAGATACTGGGAGCATGGCAATGTTAGTGAGGATTACAACAGTGAAACTGAGGAGGAAGAAGATGAAGAAAATTTAGATGAACAGAGGGGTTCTTTTATTGAAGTGCTTAGATCAGCGTTCTTGTCATTATTTTTGTTTCAGACGTTTGGATCCCGACTCTCTCTTACATTTAGTGGCCTGACAGCATTGCTTGATCAAAAGTTAGACACGGGCTATAAAATTGGGTATGTAATAGCATGGATTTTGGGCGGGAGGGGTGGCATATTGCTAACATTGTGCTTGTCTTTTGCAAGTTGGGTTTGCGGGAAAACCAGTAGTAGTGTTGTTGCACTAATTGTGGTGGCCATGTGGGTTGGCTCCTACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCGCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAG 918 0.4869 MQSHLVVGSISIGRYGGAADSSPFHSAAPSCWTNPPRRCTPLVVASSSPTAINGGQNHYAVLGVARNATAVEIKRAYRLLARKYHPDVSKDPHSEELFKSIRHAYEVLSNEATRVQYDQELHFSHNSHREKWSYSTEFEDQVRVYRWAHLRKKMHSERYWEHGNVSEDYNSETEEEEDEENLDEQRGSFIEVLRSAFLSLFLFQTFGSRLSLTFSGLTALLDQKLDTGYKIGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALIVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01652 305 Gene3D DnaJ domain 46 141 IPR036869 -
Vian2g01652 305 CDD DnaJ 57 110 IPR001623 -
Vian2g01652 305 SMART dnaj_3 56 113 IPR001623 -
Vian2g01652 305 Pfam DnaJ domain 57 118 IPR001623 -
Vian2g01652 305 PRINTS DnaJ domain signature 77 92 IPR001623 -
Vian2g01652 305 PRINTS DnaJ domain signature 59 77 IPR001623 -
Vian2g01652 305 PRINTS DnaJ domain signature 93 113 IPR001623 -
Vian2g01652 305 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Vian2g01652 305 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 34 296 - -
Vian2g01652 305 FunFam Uncharacterized protein 54 200 - -
Vian2g01652 305 SUPERFAMILY Chaperone J-domain 56 126 IPR036869 -
Vian2g01652 305 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01652 Vian-Chr2 34169214 34172549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01652 57 121 Miscellaneous Gene Families AT1G79030 41.176 8.39e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01652 - - gmx:100791619 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01652 2 34169214 34172549 Vian2g01652 2 34169214 34172549 ECH