Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01645 ATGACTAAAGCAGACTTGGTGAACAACCTGGGTACTATTACGAGGTCTGAGACCAAGGAATTCATGGAGGCGCTGCAAGCTGGTGCTGATGTAAGCATGATTGGGCAGTTCGGTGTGGGGTTCTACTCTGCATACCTTGTCGCAGAGAAAGTCATTGTTACTACCAAGCATTATGACGATGAACAGTACATTTGGGAATCTCAGGCTGGTGGCTCTTTCAGTATTACTAGGGACACTGAGGGAGAGCAACTCGGAAGGGGAACTAAGATTACTCTCTTCCTCAAGGAAGATCAGTTGGAGTACTTGGAGGAAAGGAGGATCAAGGATCTTGTAAAGAAGCACTCTGAATTCATTAGCTATCCTATCTACCTTTGGACGGAGAGAAGACAACCGAGAAAGAAATTAGCGATGACGAAGATGATGAGCCCAAGAGGGAGGAAGAAGGGGATATCGAGGATGTCGACGAGGAAAAATAGAAAGAAAGTTGCAACGTTTATGCATGCATGTGAGGGAGATGCAGTGACAAAGCTTACGAACGAGAAAGTTCCCTTTTTCAATGCTCCTATATATCTGAAAAACATGACTCAGATCGGGAAAGTTGATGAAATATTTGGCCCCATCAACGAAGCTGTGGCTGGGGACAAGTTTTACATTGATCCAAGGAAACTGTTGCCTCTTGCAAGATTTCTTCCACAACCTAAGGGACAAGCACAAGCTGGTAGAGGTGGAGGAGGTCGTGGTGGTGGCAGAGGTGGCCGTGGAGGTGGTGGAGGTTTTCGTGGAGGTGGTGGTTTTCGTGGGAGAGGTGGCCCAAGGGGGGGGAGAGGTGGTCCTCCTAGGGGTGGGGGTTTCAGGGGAAGGGGAAGATCATAG 873 0.4822 MTKADLVNNLGTITRSETKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHYDDEQYIWESQAGGSFSITRDTEGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTERRQPRKKLAMTKMMSPRGRKKGISRMSTRKNRKKVATFMHACEGDAVTKLTNEKVPFFNAPIYLKNMTQIGKVDEIFGPINEAVAGDKFYIDPRKLLPLARFLPQPKGQAQAGRGGGGRGGGRGGRGGGGGFRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01645 290 Pfam Hsp90 protein 100 135 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian2g01645 290 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1 128 IPR036890 -
Vian2g01645 290 Gene3D - 1 141 IPR036890 -
Vian2g01645 290 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 133 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian2g01645 290 FunFam Heat shock protein HSP 90-beta 1 127 - -
Vian2g01645 290 PRINTS 90kDa heat shock protein signature 9 26 IPR020575 -
Vian2g01645 290 PRINTS 90kDa heat shock protein signature 86 103 IPR020575 -
Vian2g01645 290 PRINTS 90kDa heat shock protein signature 104 122 IPR020575 -
Vian2g01645 290 PRINTS 90kDa heat shock protein signature 34 56 IPR020575 -
Vian2g01645 290 Gene3D Probable tRNA pseudouridine synthase domain 156 231 IPR038664 -
Vian2g01645 290 Pfam Gar1/Naf1 RNA binding region 161 210 IPR007504 GO:0001522|GO:0042254
Vian2g01645 290 SUPERFAMILY Translation proteins 161 217 IPR009000 -
Vian2g01645 290 MobiDBLite consensus disorder prediction 233 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01645 Vian-Chr2 34100245 34103009 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01645 K04079 - atri:130806561 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01645 2 34100245 34103009 Vian2g01645 2 34100245 34103009 ECH