Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01642 ATGGCAGCTGTTGCTCCTACTTCTGACAAAACTGCAGATTTATTGCAAAATTTGACCCTGGATTCTGAGCCAAAAGCCATTGGAGTTACTGAGCCCGCAAAGAAGGATGGACCTGGTTTTTCCAAGGGTGCTGCCAAAGGGATGGGCAAGCCGTTCAATCCAAATTCAAGCTTTGTTCCAAATGGATACCCTTCTGCATACTATTATGGAGGTTATGATGGGCAAGGTGATTGGAATGTTTATTCCAGATATATGAACCTTGATGGGGGCATGACTCAGAATAATGGTTCCAAAGATCCATTGAATGAGGGCCATCAGAATTTCTGTTACACGTTAGCTTTAAAATTAATTGATGTTGGACTGGTGCTAGCTGCTTCTTTAACTGGTGTTTATGGAGACAACTGCTCGTATATGTATCATAATGGTTATGGTTATACACCATATGGAACATATGCACCGGCCAATTCTTCTTCTCCAATGATTCAGCAAGATGGTCAGCATTATGCGCTGCAACAGTACCAATATCCATGTTCTTATTACAAATCTCCAGCTTCTGCTGACGTGTCATTTACACCAAACAATATCACTGCTACACAAGAAGAAATATCAACTGCAATGGATGCTCATCATGTTGCTTCATTAAATGTTATGAATAAAGGAAACACCGTTAACATGGCCAATAGTGATTTTACAAATAAAAATGGGTTAAAGTCATTTTTAACGGGTTCCCAGCATACAACATTGCATTCAAATGATTCTTATCAAGGGACTAGCTTGCCACCTTATGCCCCTTTGTCAGGATATCAAGGCCCTAGAATGAGTACCCATGCTACACAATTGCCAGTCCCATCAGATATGTCCTTAGTATCTGATAGACAGTCCAAACGTGGAGCCAAGGTTGGTTTATCTTCATCAATGGCCCCTGTCAAAGATTTATCTTCTCAAAGGAATCAAGGACTTCTTCAGCAACTTCCACCTTTTCCGAACTTGAATGGTTCCAGACATCCATCTGGACTTGAACTGGTTTCTGGATTCATGAACGGGATGTATCCAAGCAACAGGATGTACAGCCAATTTGGGAACACATTTAGGGCTAATTCTCGTTTTGGATCTGCTGCATATGGATCTAGAATGGGCTCAGTTGATTACAAGCGTCATGCCACAGGTGACGGGAATGGTTTTAAAAAAAGTATGGAAGGTTTCAGTGAGCTAAACAAGGGACCAAGAGCTGCCAAAAGTTCTGATAATAAAAATAACAAGAGTCTTGGACCTGTTACATTACTACTGAAAGGACAGAACCTTCCAGTGAAGAGCGATAACAAAGAAGTTCTTTTAGCATCCAATAAGGAACAATACAATGGGAAAGAATTTTCAGAGAATTATTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATTAAGTATAGTGTTTGGGCAAGTACTCCTAATGGCAATAAAAAACTTGATGCGGCATATCAAGAAGCGAAGGGAAAGACTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACCAGTGGGCAATTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGGTAAAAGTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGCGCATTGAGGCATATAACACTAGAAAACAATGAAAACAAACCTGTAACAAATAGCAGGGATACTCAGGAGGTTAAGCTTGAGAAGGGAGTTCAAGTTGTGAAAGTTTTCAAGGAGCATTCAAGCCAAACATGCATCTTGGATGATTTTGAGTTTTATGAGGCTCGTGAAAAGGCAAATCAGGAGAAAAAATCTAAGGAGCAGCAGTTCCCAAAACAGATCAGCAAACCCAGTGATTTAACAATTGGGACAGTCACATTACTGAAGTCTCTAGATGCTACCTTGATGAAGGAAGCTGCTACTGCAAATACAGCAGAAGAAAGAATGAATTCAGAGGGGCCCCTAGAAGGAGGAGATGGATCTACCACAGCACCTGAAGACTCTTCCAAGAGCTGTTAA 2091 0.4065 MAAVAPTSDKTADLLQNLTLDSEPKAIGVTEPAKKDGPGFSKGAAKGMGKPFNPNSSFVPNGYPSAYYYGGYDGQGDWNVYSRYMNLDGGMTQNNGSKDPLNEGHQNFCYTLALKLIDVGLVLAASLTGVYGDNCSYMYHNGYGYTPYGTYAPANSSSPMIQQDGQHYALQQYQYPCSYYKSPASADVSFTPNNITATQEEISTAMDAHHVASLNVMNKGNTVNMANSDFTNKNGLKSFLTGSQHTTLHSNDSYQGTSLPPYAPLSGYQGPRMSTHATQLPVPSDMSLVSDRQSKRGAKVGLSSSMAPVKDLSSQRNQGLLQQLPPFPNLNGSRHPSGLELVSGFMNGMYPSNRMYSQFGNTFRANSRFGSAAYGSRMGSVDYKRHATGDGNGFKKSMEGFSELNKGPRAAKSSDNKNNKSLGPVTLLLKGQNLPVKSDNKEVLLASNKEQYNGKEFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKGKTGGCPIFLLFSVNTSGQFVGLAEMLGPVDFGKSVDYWQQDRWTGCFSVKWHVIKDIPNSALRHITLENNENKPVTNSRDTQEVKLEKGVQVVKVFKEHSSQTCILDDFEFYEAREKANQEKKSKEQQFPKQISKPSDLTIGTVTLLKSLDATLMKEAATANTAEERMNSEGPLEGGDGSTTAPEDSSKSC 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01642 696 FunFam YTH domain family 1, isoform CRA_a 443 616 - -
Vian2g01642 696 MobiDBLite consensus disorder prediction 25 46 - -
Vian2g01642 696 MobiDBLite consensus disorder prediction 398 422 - -
Vian2g01642 696 CDD YTH 465 601 IPR007275 GO:0003723
Vian2g01642 696 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 125 669 IPR045168 -
Vian2g01642 696 ProSiteProfiles YTH domain profile. 464 601 IPR007275 GO:0003723
Vian2g01642 696 Pfam YT521-B-like domain 464 602 IPR007275 GO:0003723
Vian2g01642 696 Gene3D ph1033 like domains 442 616 - -
Vian2g01642 696 MobiDBLite consensus disorder prediction 664 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01642 Vian-Chr2 34065581 34069459 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01642 - K20102 gmx:100818027 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01642 2 34065581 34069459 Vian2g01642 2 34065581 34069459 ECH