Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01634 ATGGAAAAACCCTGGCTTTTGAGATGGGTGTTAGTGGTGGGGGTGATGTGTTGGTATGGGGAAGGGATTGGTGTGAATTGGGGAACCCAGGCAACACACAAGTTACCGCCAGAAACAGTGGTTCAGATGTTGAGGGACAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGAATCGACCATGAGTGCATTGGCTGGGACTGGCATTGAAGTCATGGTGGCTATCCCTAATATCCAGCTTGCTGAGATGAATGACTATGGCAGGGCCAAACAGTGGGTTAAGAAAAACGTCACGCGTTACAACTTCAATGGGGGTGTTAATATCAATTCTGCATTGGTTAACGAGAAGTTTAAGTATGTAGCAGTTGGGAACGAGCCGTTTTTGAAATCCTACAACAATTCGTTCTTGAATATCACCTTTCCTGCTCTGCAGAACATTCAAAATGCCCTTAACGAAGCAGGCCTTGGAGACAAAGTGAAGGCTACAGTACCCTTGAATGCAGATGTGTATCAGTCTCCAGATAACAATCCTGTTCCATCTGCAGGAATATTTAGGCCTGACATCAGTGGTCTCATGACCCAGATGGTGCAGTTTCTCAGCAAGAATGGTGCACCATTTACTGTGAACATTTACCCCTTCTTAAGTCTCTATGGAAACGATGATTTTCCGTTGAACTACGCCTTCTTCGACGGTGTAGACAATCCGGTAAATGATAATGGTACTCCATACACGAATGTCTTTGATGCAAATTTCGATACCTTGGTTGCTGCTCTCAAATCAGTGGGGTTTGGAGACCTTCCTATTTTGGTGGGAGAAGTAGGATGGCCAACAGAAGGAGACAAGAATGCCAATGTTCGCTTAGCTTTGAGGTTCTATAATGGCCTTCTGCCAAGGCTCGCAGGCAATAGAGGCACGCCGCGCCGCCCTGGACACATTGAAGTTTATCTTTTTGGTTTCATTGATGAGGATGCCAAGAGCATTGCACCAGGAAACTTCGAACGCCACTGGGGAATATTCAAATATGATGGACAACCCAAGTTTCCAATGGACCTTTCTGGTCAGAACCAAGAAAAATTTCTGATAGGTGCACAGAATGTGAAGTACCTTGCTCCTAGGTGGTGCATGTTTAATCCTGATGCTAAGGATCTAACCAACCTTCCAGATAACATCAACTATGCTTGCACCTTTGGAGATTGCACTGCACTTGGATACGGATCCTCTTGCAACAGCCTTGATGCTAATGGCAATGCCTCGTATGCCTTTAACATGTACTTCCAGGTGCAAAATCAGAACCCCATGGCCTGCAATTTTCAAGGTTTGGCCAAAATTACTACGGACAATATCTCAACACCCATTTGCAATTTTATCGTTCAGATAGTCGGTTCTTCAGCCTCTTCTTTGATTCCCTCACTTGTTGCTATCTTGTTTGTTAGTTTATTCATGATCCTGTTTTGGTAA 1461 0.4442 MEKPWLLRWVLVVGVMCWYGEGIGVNWGTQATHKLPPETVVQMLRDNGIQKVKLFDADESTMSALAGTGIEVMVAIPNIQLAEMNDYGRAKQWVKKNVTRYNFNGGVNINSALVNEKFKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGLGDKVKATVPLNADVYQSPDNNPVPSAGIFRPDISGLMTQMVQFLSKNGAPFTVNIYPFLSLYGNDDFPLNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANVRLALRFYNGLLPRLAGNRGTPRRPGHIEVYLFGFIDEDAKSIAPGNFERHWGIFKYDGQPKFPMDLSGQNQEKFLIGAQNVKYLAPRWCMFNPDAKDLTNLPDNINYACTFGDCTALGYGSSCNSLDANGNASYAFNMYFQVQNQNPMACNFQGLAKITTDNISTPICNFIVQIVGSSASSLIPSLVAILFVSLFMILFW 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01634 486 Gene3D - 370 467 - -
Vian2g01634 486 SUPERFAMILY (Trans)glycosidases 23 351 IPR017853 -
Vian2g01634 486 Pfam X8 domain 374 442 IPR012946 -
Vian2g01634 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 445 IPR044965 GO:0004553|GO:0005975
Vian2g01634 486 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
Vian2g01634 486 FunFam Glucan endo-1,3-beta-glucosidase 8 369 465 - -
Vian2g01634 486 Gene3D Glycosidases 21 360 - -
Vian2g01634 486 FunFam Glucan endo-1,3-beta-glucosidase 5 22 358 - -
Vian2g01634 486 SMART X8_cls 373 456 IPR012946 -
Vian2g01634 486 Pfam Glycosyl hydrolases family 17 23 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01634 Vian-Chr2 33963362 33966352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01634 6 461 Miscellaneous Gene Families AT1G64760 74.561 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01634 - - gmx:100815300 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01634 2 33963362 33966352 Vian2g01634 2 33963362 33966352 ECH