Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01633 ATGGGTGCGAGTCGAAAGCTCCAGGGAGAGATAGATCGTGTTCTCAAGAAGGTTCAGGAAGGTGTTGAAGTCTTTGATAGCATCTGGAACAAGGTTTACGACACGGACAATGCTAACCAGAAGGAGAAATTTGAAGCAGACCTCAAGAAGGAGATTAAGAAGCTACAGAGGTATAGAGACCAAATCAAGACGTGGATTCAGTCCAGTGAGATCAAGGACAAGAAGGTTAGTGCCTCATATGAGCAAGCTTTGGTGGATGCACGCAAGCTAATTGAACGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACAAAGACCAAAGCATTTTCTAAAGAAGGCTTAGGTCAGCAGCCTAAGACTGATCCGAAAGAGAAAGCTAAATCAGAGACAAGGGACTGGTTAAACAATGTGGTTGGGGAGTTAGAATCACAGATTGATAACTTTGAAGCAGAGCTTGAAGGGCTTTCTGTTAAGAAGGGAAAGAGCAGGCCACCCAGATTGACACACCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAATGTGAATTCATTTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGCAGGTTAATGATGTTAAAGATTTCTTGGATGACTATGTTGAGCGTAATCAGGAGGATTTTGATGAGTTTAATGATGTTGATGAACTGTACAGTTCATTACCTTTAGACAAGGTGGAGACCCTAGAAGATCTTGTTACAATTCCCACTGGTCTTTCTAAGGTGGCACCTAGTCTTGGCGTGAAAAATTCTTCAGCAGTATCAACATCACAATCAGCATCAGCATCTGCATCACAAACATCTGAGCAAGCTGACGACACAGCATCCCAGGATAGCAATTCTGACAATGTTGCCAAAACTCCACCTCCTAAAAGTGGTGGAATTGGTTCTACTGCTTCAACTCCTACTGGCAACCACACTTCTCCGATTTCTGTGAATGTTTCTAGTCATACCCTGTCTAGTCCACCTGCTGTTGCAGCCATACCTAGTTCAAATTCTGTGCGGAATGTCTTGGAGAGTAGTAATGTTACCAATTCATCTTCTGTAAATCAGTCTACCTCTACAAAGGAAGAAGACATTAATAGCTTCCCTAGCCGGAGACCATCTCCATCACTTTCTGACGCAACACTTTTGAGGGGAAGAAACTCTCTATCAAATCAAGCAACAGCCAGCATCCCTCTTGGTTCTGCAAACATGGCCCCTAGCAATGGGGCCCTTGGATCAGTCCCTTCAGCCTCTGAAATAGCTAAAAGGAATATGTTGGCAGCTGATGATAGACTTGGAAGTAGTGCGATGGTGCAGCCTCTTGTATCCCCGCTAAGTAATAGATTGATCTTGCCTCAGGCTGCAAAGGCTAATGATGGAACTGTTTCAGTTGACTCTGGTGCTGTTAACGATGCTGCTGCAGCTGTATCTGGGAGAGTTTTTTCCCCTTCTGTGGTTCCTGGCATGCAATGGAGACCAGGAAGTCCCTTTCAGAATCAGAGTGATGCAGGCCAGGTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAACAAGGGCACAGTACCCTTCTTAATATGCCTTCTCTTGTTGGGGGAAACCATAAGCAGTTTTCTGCCCAGCAGCAAAACCCCCTTTTGCAACAGTTTAACTCTCATGGCTCATCTGTTTCTTCTCAATCTGGTATTGGACTTGGGGTCCAGTCCACTAGTCTCAGTGGTATTTCTTCTGCATCACTACAGCAGCCACCCAATTCTGTCCATTCCCCCTCTAGTCAACAGTCACTGATGCCAGGTGTTTCTAAAGATTCAGACGGTGGCAATTCTAAGAGTGAAGAACAGCAGCAACATCAGAACTTTCCTGATGAGCCAACAACTGAATCTACTGCTAGCACTGTGATTGGCAAGAATCTCATAAATGAAGATGATTCAAAGTCAGCATATGCTGTAGATTCTCCTGTAGGAGTGTCTGCCTCTCTTCAAGAATCTGCTCACACTTCCAGAGATATTGATTTGTCTCCGGGCCAACCATTACAATCCAATCAACCTACTGGCAACCTTGGTGTCATTGGTAGAAGAAATGGTGCTGAACATGGAGCAATTGGTGATAGTTTTAGTGCATCCAGTGTTAGTTCTGGTGGAGTGCGTGATCAGTTGTATAATTTGCAAATGCTTGAGGCAGCCCACTTCAAAATTCCCCTACCCAAAGACTCTGAACGGCCCAGGAGTTATACACCTAAGCATCCGACAATTACACCTCCAAGTTATCCTCAAGTACAGTCACCTATTGTTAATAATCCTGCCTTTTGGGAGAGAGTGGGTCTGGAACCATTTGGCACTGATACTCTATTCTTTGCATTTTATTACCAACAGAATACATACCAACAATATTTGGCTGCAAAGGAGTTAAAGAAGCAGTCTTGGAGATACCACAGAAAGTATAACACTTGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACTGATGAATATGAACAGGGAACTTATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGGTGTCAAAGAATTAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGATGATCTCCTTGTATAA 2673 0.4314 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFNDVDELYSSLPLDKVETLEDLVTIPTGLSKVAPSLGVKNSSAVSTSQSASASASQTSEQADDTASQDSNSDNVAKTPPPKSGGIGSTASTPTGNHTSPISVNVSSHTLSSPPAVAAIPSSNSVRNVLESSNVTNSSSVNQSTSTKEEDINSFPSRRPSPSLSDATLLRGRNSLSNQATASIPLGSANMAPSNGALGSVPSASEIAKRNMLAADDRLGSSAMVQPLVSPLSNRLILPQAAKANDGTVSVDSGAVNDAAAAVSGRVFSPSVVPGMQWRPGSPFQNQSDAGQVRGRTEIAPDQREKFLQKYQQVQQGHSTLLNMPSLVGGNHKQFSAQQQNPLLQQFNSHGSSVSSQSGIGLGVQSTSLSGISSASLQQPPNSVHSPSSQQSLMPGVSKDSDGGNSKSEEQQQHQNFPDEPTTESTASTVIGKNLINEDDSKSAYAVDSPVGVSASLQESAHTSRDIDLSPGQPLQSNQPTGNLGVIGRRNGAEHGAIGDSFSASSVSSGGVRDQLYNLQMLEAAHFKIPLPKDSERPRSYTPKHPTITPPSYPQVQSPIVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTEFTFEYNYLEDDLLV 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01633 890 MobiDBLite consensus disorder prediction 591 646 - -
Vian2g01633 890 PIRSF NOT_su_3_5 1 890 IPR012270 GO:0006355|GO:0030015
Vian2g01633 890 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Vian2g01633 890 Coils Coil 41 61 - -
Vian2g01633 890 Coils Coil 132 159 - -
Vian2g01633 890 MobiDBLite consensus disorder prediction 269 339 - -
Vian2g01633 890 MobiDBLite consensus disorder prediction 752 775 - -
Vian2g01633 890 MobiDBLite consensus disorder prediction 110 131 - -
Vian2g01633 890 MobiDBLite consensus disorder prediction 352 388 - -
Vian2g01633 890 Gene3D - 730 885 IPR038635 -
Vian2g01633 890 MobiDBLite consensus disorder prediction 676 705 - -
Vian2g01633 890 Pfam NOT2 / NOT3 / NOT5 family 746 884 IPR007282 GO:0006355
Vian2g01633 890 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 730 885 - -
Vian2g01633 890 MobiDBLite consensus disorder prediction 676 712 - -
Vian2g01633 890 PANTHER CCR4 NOT-RELATED 24 886 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01633 Vian-Chr2 33933005 33944136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01633 K12580 - gmx:100783415 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01633 2 33933005 33944136 Vian2g01633 2 33933005 33944136 ECH