Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01617 ATGCCTAGTACTAGTAGGAATCCTCTTGTGGTTGGGCGTGTTATAGGGGAAGTTATAGACCCCTTTGAATGTTCCATTCCTTTTAGGGTCTCCTATGGCAATAGAGAGGTCAACAATGGTTGTGAGCTTAAACCTTCCCAAGTTGTAAACCAACCCAGAGTGACTGTTGGTGGAGATGATCTCAGGAACTTCTATACTCTGGTGTTGGTAGATCCTGATGCTCCCAGCCCTAGTAACCCTAATTCCAGGGAGTACCTTCATTGGTTGGTGACTGATATTCCAGCAACTACCGGCGCTAGTTTTGGTAACGAGGTTGTAAGTTATGAAAGTCCACGACCAACTATGGGGATTCATCGTTTCGTGTTTGTGTTGTTCCGTCAACAGTATCGACAGAGAGTGTATGCTCCTGAATGGCGCCAGAATTTCAACACCAGAGAATTTGCTGAACTTTACAACCTTGGATTGCCAGCTGCTGCAGTCTTCTTCAACTGTCAGAGGGAAGCTGGTTCTGGTGGTAGGACATTTTGA 528 0.4583 MPSTSRNPLVVGRVIGEVIDPFECSIPFRVSYGNREVNNGCELKPSQVVNQPRVTVGGDDLRNFYTLVLVDPDAPSPSNPNSREYLHWLVTDIPATTGASFGNEVVSYESPRPTMGIHRFVFVLFRQQYRQRVYAPEWRQNFNTREFAELYNLGLPAAAVFFNCQREAGSGGRTF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01617 175 FunFam Terminal flower 1 2 173 - -
Vian2g01617 175 CDD PEBP_euk 27 164 IPR035810 -
Vian2g01617 175 Gene3D - 2 170 IPR036610 -
Vian2g01617 175 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Vian2g01617 175 Pfam Phosphatidylethanolamine-binding protein 52 155 IPR008914 -
Vian2g01617 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Vian2g01617 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 167 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01617 Vian-Chr2 33562217 33565153 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01617 K16223 - gmx:100781509 325.479