Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01611 ATGATTCCTCTGTCCCGTAACTCGGTCTCTGTTCATCTGGGTGGAGTACCCCGTGACCCTCTTCACCCGATTACGTTGGACTACTCTCTTAATAACCCTTTTTCTTCTCTTTCTCTGTTTTGGAATTGCAAGAGAAAAAAGTGGAAAATATCTACTACTATGGCTTCTAATATCAGGACCAACAATTACCTGCGCCATGTTGAATCAATGAAGCTTATGCCATCAGGTGCAGGTCACATATCACACTTGAATGCCGTTATACTTGGTGATTCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCTAGTGAGGACTTTGCTAGCCAAGCTAATGTTCAATCCCCAGAACAGTATCTGAAGATGTACAAGAGATCCATTGAGGACCCTGCAGGGTTCTGGTCTGAGATTGCGGAAGAGTTTTATTGGAAACAAAAATGGGGTCATAAAGTATGTGATGAAAATTTTGATGTACGGAAAGGGAATATCAAGATTGAGAGACTGATTGTGGCTGTACGTTGTGTTGTGTGTCTGTTTTCTCTTGTTGCATTGCTTCAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCCGGACTTGGTGACAAGGTAGCCATTTATTGGGAGGGCAATGAACCTGGTCTGGATGGTACTTTGACATACACCCAGCTTCTTCATCAAGTTTGCCAGCTTGCTAACTATCTGAAGGATAATGGTGTGAAAAAGGGAGATGCTGTAATTATTTATTTGCCTATGCTTATGGAGCTGCCCATCGCAATGCTTGCCTGTGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCACTTGCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGGTTCTCTATCTGAAAGATATTGTTGATGTTGCAATCAAGGATTCAGCCCAAAATGGAGTTTCGATTGATAAATGCTTAGTTTATGAAAACTCATGGGCAACGAAGAGAGAAGATACCAAATGGGAGGATGGGCGTGATGTATGGTGGCAGGATGTCGTTCCTCAATATCCTACTAGTTGTCCAGTGGAGTGGGTTGATGCCGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCTTGCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTCAAGTATGCATTTGACTACAAGCAGTCTGACATCTACTGGTATCCCCTAGAAGCATTTTCTTCTAATCTTTTTATCTTTGACATGTTCTTGATGAATCTGGTTCACTACCGTTACATGAATGCTTTATACTCTGACTACAGGTGTACAGCAGATTGTGGTTGGATTACTGGGCATAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATTCTGGTCGATGTTGGGACATTGTTGACAAATATAAAGTGACAATATTCTACACTGCTCCCACACTGGTGCGGTCTCTCATGCGTGATGGTGATGAGTTTGTTACTCGTCACTCACGGAAATCTTTACGAGTCCTAGGAAGTGTCGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAATTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATTACTCCACTACCAGGTGCTTGGCCCCAGAAACCCGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAATGGTGTTGAAATAGAAGGTGAGTGCAGTGGATATTTGTGTGTTAAAAATTCGTGGCCTGGAGCTTTCAGAACGCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCGGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGGATTGGCACAGCAGAAGTGGAATCAGCTCTAGTTTCACATCCTAAATGTGCAGAGGCTGCTGTGGTTGGCGTTGAGCACGCGGTGAAAGGACAGGGTATCTATGCATTTGTTACAGTGGTGGATGGTGTTCCTTACAGTGAGGAACTACGGAAGGACCTCATACTCATTGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTCCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCTTCCAGGCAGTTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAACGTGGTCAATCAACTTATAGAAATTGCTGATTCTTGA 2418 0.4351 MIPLSRNSVSVHLGGVPRDPLHPITLDYSLNNPFSSLSLFWNCKRKKWKISTTMASNIRTNNYLRHVESMKLMPSGAGHISHLNAVILGDSLATEEDDFVLPSEDFASQANVQSPEQYLKMYKRSIEDPAGFWSEIAEEFYWKQKWGHKVCDENFDVRKGNIKIERLIVAVRCVVCLFSLVALLQWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTQLLHQVCQLANYLKDNGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALAQRIIDCKPKVVITCNAVKRGPKVLYLKDIVDVAIKDSAQNGVSIDKCLVYENSWATKREDTKWEDGRDVWWQDVVPQYPTSCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKQSDIYWYPLEAFSSNLFIFDMFLMNLVHYRYMNALYSDYRCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEFVTRHSRKSLRVLGSVGEPINPSAWRWFYNVIGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDENGVEIEGECSGYLCVKNSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHAVKGQGIYAFVTVVDGVPYSEELRKDLILIVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIEIADS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01611 805 Gene3D - 676 805 IPR045851 -
Vian2g01611 805 FunFam Acetyl-coenzyme A synthetase 676 805 - -
Vian2g01611 805 SUPERFAMILY Acetyl-CoA synthetase-like 105 800 - -
Vian2g01611 805 Pfam Acetyl-coenzyme A synthetase N-terminus 118 198 IPR032387 -
Vian2g01611 805 ProSitePatterns Putative AMP-binding domain signature. 385 396 IPR020845 -
Vian2g01611 805 Pfam AMP-binding enzyme 207 680 IPR000873 -
Vian2g01611 805 Gene3D - 99 675 IPR042099 -
Vian2g01611 805 CDD ACS 116 792 - -
Vian2g01611 805 PANTHER ACETYL-COENZYME A SYNTHETASE 459 801 - -
Vian2g01611 805 Pfam AMP-binding enzyme C-terminal domain 689 767 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01611 Vian-Chr2 33438763 33445881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01611 60 804 Acyl Lipid Metabolism Gene Families AT5G36880 77.584 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01611 K01895 - gmx:100808939 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01611 2 33438763 33445881 Vian2g01611 2 33438763 33445881 ECH