Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01605 ATGAAGAACCGAGCATCAGGGTTTCTGAAGCAGATCATATCAAATCTGAGCTCAATGGCAAAGTCAAAAACCATGGCTTTGAAGTCCAAAACAAATGCCATAAGGGCTCGTTTGCTCATATTCTCCCTGATGAAGAACAAAAAGTTGTTGATGAGTTCCCTCTCAGAGAAGTTTCATTCTGTGTGGGGGCACGATTCTCAGTCCAAGGATAATGATTGCTTATTGGAAGATGGCACTGACCAAAGCAAGGCCATAGTGTTGTACAACAACTCACTCTCCTTGCCAAACCCCAGTGGAACCCTGGTGGTGGAGGAGCAAGATCAAGATGGCTATGAAGGTTACTACAACTATGAGTGCGGTGATGATGATGATGATGATGATGATGACAAGTACCCGGATCTCACACACACCCTTTTTGATTCTGAGGATTTGGATCTTGGAGGGTCGGTGATTGACTTGGTGAAGAACTCCAAGGAAGAGGCAGGGAAAGAGTTTAAACTGGAGGATGAGATTGACTTTGCAGCTGACCTTTTCATCATGAAGTTTCGCAGACAAATGGATTTGCAGAAGCAAGAGTCTTTCAATAGGAAGAGGGAAATGCAGAAAAAAGGTGCATGA 618 0.4401 MKNRASGFLKQIISNLSSMAKSKTMALKSKTNAIRARLLIFSLMKNKKLLMSSLSEKFHSVWGHDSQSKDNDCLLEDGTDQSKAIVLYNNSLSLPNPSGTLVVEEQDQDGYEGYYNYECGDDDDDDDDDKYPDLTHTLFDSEDLDLGGSVIDLVKNSKEEAGKEFKLEDEIDFAADLFIMKFRRQMDLQKQESFNRKREMQKKGA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01605 205 PANTHER EMB|CAB67623.1-RELATED 1 202 - -
Vian2g01605 205 Pfam Cotton fibre expressed protein 168 201 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01605 Vian-Chr2 33348719 33349336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01605 - - gmx:100807332 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01605 2 33348719 33349336 Vian2g01605 2 33348719 33349336 ECH