Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01604 ATGGAATGTGATGAGGGTAACCTTCTTCATGATAAGGAAGGGTCTCATATCAAAGAGAAAGATGATCATGGACACGAACTTGATGATGAAGAAAGCAATAGTCCAAACCCTGTTTTCTTCCACATGCCAAAGCGCAAGCACCATTTCAACTTTCCCTGCATCCATGCCCCTGATGTTGTCGATGATGAACACCGTTTTTCATTTGAGGTTGAAACTGATGTGCCTAAGGGTGTTGTTACCCTGCCAAAAACCCCAGATTACATGTTCAATATATTTGTCCCTGGAGAAAAAAAGAGCCCTCTTCTCTCACCATTTTCTGTGAGGGTGTCCAATTATTCTGCATTGGATGAAAGTGAAGAAACTGGAAACGATCATGTTGATGTTCAGGCTGAGGATTTTATCAGAAGGTTCTATGAACAGCTTAGGTCGCAAAGTCCCGTGCAGTTCCTAGGTTACTAA 459 0.4227 MECDEGNLLHDKEGSHIKEKDDHGHELDDEESNSPNPVFFHMPKRKHHFNFPCIHAPDVVDDEHRFSFEVETDVPKGVVTLPKTPDYMFNIFVPGEKKSPLLSPFSVRVSNYSALDESEETGNDHVDVQAEDFIRRFYEQLRSQSPVQFLGY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01604 152 MobiDBLite consensus disorder prediction 1 39 - -
Vian2g01604 152 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 32 150 - -
Vian2g01604 152 MobiDBLite consensus disorder prediction 1 32 - -
Vian2g01604 152 Pfam Cotton fibre expressed protein 124 144 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01604 Vian-Chr2 33319244 33319829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01604 - - gmx:100806803 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01604 2 33319244 33319829 Vian2g01604 2 33319244 33319829 ECH