Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01594 ATGTCGTCTGTGCCAGCACGAACAGGGCGACAAAGACAGCGTTATGAAGACAATTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGAGAAAGGACAACACAGATCTAATGGGAGAAACTGAGATAATGGAAGTACTAATGATTTCTTCTCCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTCACAGAAGCTGCTTGCCGCGAAGCTTTAGAAGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAAGACTTGTGTAGCATTGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGCATTGGCCAGAGCAGAAAAATCGTTCTCGCCAATGGTTAAACATAAAAGAGGCATTCAGACTCAGCAGATATGACTGGATGTGTAATGCACTTGAGGCATTTTTGAGAGTCATGGAAGAGGAGAGAAAGCTTGATGATGAGAAGCAAGAGCAGAATACTGAACTTGAACAACCTTCAATTATGGTAGCAGATGTGTCAGAATGCCAAACTATGTCACCTAACTGCTATAAAAGATCCTCTACCATGCACATGCCTCCTTCGGTCAATCTTCTGTCACGTGCTACTCAAGAGATAGCCATCCACTTTGGTTATTGA 696 0.4339 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWRKDNTDLMGETEIMEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCSIEGGCRGYMFALEVTEELEHWPEQKNRSRQWLNIKEAFRLSRYDWMCNALEAFLRVMEEERKLDDEKQEQNTELEQPSIMVADVSECQTMSPNCYKRSSTMHMPPSVNLLSRATQEIAIHFGY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01594 231 ProSitePatterns Nudix box signature. 62 83 IPR020084 GO:0016787
Vian2g01594 231 FunFam Nudix hydrolase 13 mitochondrial 4 164 - -
Vian2g01594 231 CDD Nudix_Hydrolase_9 21 154 IPR047198 GO:0016462
Vian2g01594 231 Pfam NUDIX domain 45 153 IPR000086 -
Vian2g01594 231 Coils Coil 164 184 - -
Vian2g01594 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 164 - -
Vian2g01594 231 ProSiteProfiles Nudix hydrolase domain profile. 18 162 IPR000086 -
Vian2g01594 231 SUPERFAMILY Nudix 13 167 IPR015797 -
Vian2g01594 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01594 Vian-Chr2 33088502 33091909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01594 K07766 - gmx:100794003 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01594 2 33088502 33091909 Vian2g01594 2 33088502 33091909 ECH