Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01573 ATGGAGGATAGTTTCAGAGTGCGAGTAGAGAGAGCCTTTGGTTCTCTTCCAATACCCTCTTCTTCTATCAACTCTCTGTGGTCTCTCACCGAAGACGAAATCGATAACGCACGCTCCAAACGAACCCTCCAACCCCAACCCTACCCTTTTTCCAGTTCGCGGGTTCAGCCGGAGGACCTAGACGATCTTGAAGACGACGACGTCGACGAAGAAGCACCACGTGGACCCTCTAAACCCCCCGATTACGATGATGAACAGTGGCAGATTAGGTCTGGTATTGGCCAAGATTGCACCCTCGATTACGAGGAAGAGGAAGATCAATATGACAAACAGGCTATTGGGAAAGAGGATTCGGGTGATCGTGTGTACATGAAGGATGTAAAGGACGATGGAGTTGAGATTAGTTCTAGCAGTGTTTTCCCCACCTCGTTTAGAGATTTTGTGCGAGATCCGCGTGCAAATCATTTGGCTGCAAGGATTAAGCTGAAGCAGGATGATGAAGCCGCTAAAAAGATAGATGCTCTACATGTCTCTGAGAAATCCACACCAGACGTAGGCAGTGGCGGAGATGCTACTAATCCCAAGTCAATTTTGAAGAGTAAGGATAATTCTGGGGAGTCCAGGCCTCAGAAACGGGTTCGGTTTGACCCTGAATGTGATGATAAAGATAATTATGATGATGATGGGCACGAAGAAGCTAGGGATGTTCGCATGAAGACCTCTTCAATGGAAGAGGTTCCTGCTTCGGACCAGTTGTCAAAGTCACAGGAATTTAATTTAGCAGTTCCGGATTACATTCGAAATCCTTCCAGATACACTCGATATACCTTTGATGATTCTCCTAGTGAAATGGATGACAAATCAAACAAGGAAGCATACATGAGCTTCCTTTCGCAGTTGAATAAGGGAACTGCATCTCAAGCGGATGATGTTCTGGATGATCTTCCATCTGTAACCTTTATATCAAAGAAGAAATCCGGTGATTCCTGTATGCGTGACAGTGAGATGGTTTCAAAGCACAAGCTTGATGATGGCGCCCTGAATAGAATAAGCTTCCCTGTTGGCATTGCTGCTGGTGACTCTGAAAACAGTGACGTTTCTGCAATGGAGGAGGATGAACAAGAAGTTGGGGATGTTAAAAAGAGCATGCAGAAGTTCAACCGCAAGTACAGGAAGAAAACCCAAGAGGAGTTGGAGGAGCCAATTGTGTAA 1212 0.4579 MEDSFRVRVERAFGSLPIPSSSINSLWSLTEDEIDNARSKRTLQPQPYPFSSSRVQPEDLDDLEDDDVDEEAPRGPSKPPDYDDEQWQIRSGIGQDCTLDYEEEEDQYDKQAIGKEDSGDRVYMKDVKDDGVEISSSSVFPTSFRDFVRDPRANHLAARIKLKQDDEAAKKIDALHVSEKSTPDVGSGGDATNPKSILKSKDNSGESRPQKRVRFDPECDDKDNYDDDGHEEARDVRMKTSSMEEVPASDQLSKSQEFNLAVPDYIRNPSRYTRYTFDDSPSEMDDKSNKEAYMSFLSQLNKGTASQADDVLDDLPSVTFISKKKSGDSCMRDSEMVSKHKLDDGALNRISFPVGIAAGDSENSDVSAMEEDEQEVGDVKKSMQKFNRKYRKKTQEELEEPIV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01573 403 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 398 IPR029338 -
Vian2g01573 403 MobiDBLite consensus disorder prediction 38 94 - -
Vian2g01573 403 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 255 305 IPR029338 -
Vian2g01573 403 Coils Coil 369 389 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 71 85 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 360 380 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 173 256 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 201 220 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 227 241 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 102 121 - -
Vian2g01573 403 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01573 Vian-Chr2 32663466 32665362 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01573 - - vra:106753667 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01573 2 32663466 32665362 Vian2g01573 2 32663466 32665362 ECH