Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01571 ATGAGAAAATATTATGTCAAAGCATATAGAGGAAAAGCTCCTGGGAGCAACGTACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACCTATACAGTGATAAGCTCTGATCAATCAAATGATAGTTCAACAATCTCAAAGATTTCAAGTCCACAGGGAAGTACTAATAAAAGCATACAAGTTGGACAAGGGAATCTAATGCTACTTTATTCAGCAGATGAGGGAAAACTGACTCACTATGTTAACAGTAGAACCCTGGTTACAGCACCAGTTGAACAATCATACAGTTATTATTCTGGAAACGATGGGACTGAGAAGGATCCCCAGGCTTCGGGGGCATATGTCTTTCGTCCAAATGGCTCGTTTCCCATTAAATCAGATAATCAGGTATCTTTTACTGTCCTGCATGGTCCAATATTGGATGAAGTGCATCAACAGCTCAATCCATGGGTATCCCAGATTACAAGGGTATTCAAGGAAAAAGAGCATGCTGAAATTGAGTTCACAGTTGGGCCTATACCAGTGGATGATGGCATTGGGAAAGAAATTACTACTCAATTTAAAACGACAATGAAGACCAACAAGACATTCTATACCGATTCTAATGGACGTGACTTCATTAAGAGGATTCGAGATTTCAGGCAAGATTGGGATCTCCAAGTGAACCAACCCATAGCTGGAAATTATTATCCAGTTAATTTAGGAATATATATTCAAGATAGTAGTGTGGAATTCTCAGTGTTGGTGGACCGCTCAGTTGGAGGTTCCAGCTTGGAGGATGGCCAAATGGAGGTGATGCTGCATAGGAGGTTGATTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCATTGCTGATAAGTGCGAGGGCTTAACGATTCAAGGAAAACTTTACCTTAGAATTGACAATAAAGGTGAAGGTGCCAAGTGGCGTCGCACAGTTGGCCAGGAATTATATTCACCGCTGCTTTTGGCCTTCACAGAACAGGATGGGGATAATTGGTTACATTTTGCTACATCAACATTTTCAGGCATAGATTCTTCCTACAGTTTACCAAACAACGTTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCGTAAGATTGGCTCACCTTTACGAGATCGGAGAGGACAATAATTACTCAATAATGGCTAGTGTGGAATTGAAAAAGTTGTTTCCTAACAAGAAGATAAATAAAGTAACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGCTGAAATGGAAAAGAGGAAGTTAAATTGGAAGGTAGAAGGTTCCACTGAAGAACCTGAGGTGGTGAGGGGAGGACCTGTTGATCCTATAAACTTGGTGGTTGAACTTGCTCCAATGGAGATCCGGACATTCTTCATTGACTTTAATCCTCTCCACACAGTTTCTGAAGCTGAAAATCATATGGCAAATTATCGAAGCATCCAATAA 1485 0.4061 MRKYYVKAYRGKAPGSNVLKYWLAFPVSVPPLGFSTYTVISSDQSNDSSTISKISSPQGSTNKSIQVGQGNLMLLYSADEGKLTHYVNSRTLVTAPVEQSYSYYSGNDGTEKDPQASGAYVFRPNGSFPIKSDNQVSFTVLHGPILDEVHQQLNPWVSQITRVFKEKEHAEIEFTVGPIPVDDGIGKEITTQFKTTMKTNKTFYTDSNGRDFIKRIRDFRQDWDLQVNQPIAGNYYPVNLGIYIQDSSVEFSVLVDRSVGGSSLEDGQMEVMLHRRLIHDDARGVGEVLNETVCIADKCEGLTIQGKLYLRIDNKGEGAKWRRTVGQELYSPLLLAFTEQDGDNWLHFATSTFSGIDSSYSLPNNVALLTLQEFKNGKVLVRLAHLYEIGEDNNYSIMASVELKKLFPNKKINKVTEMSLSANQERAEMEKRKLNWKVEGSTEEPEVVRGGPVDPINLVVELAPMEIRTFFIDFNPLHTVSEAENHMANYRSIQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01571 494 Gene3D - 67 331 - -
Vian2g01571 494 Gene3D - 3 66 IPR013780 -
Vian2g01571 494 FunFam Alpha-mannosidase 351 476 - -
Vian2g01571 494 SUPERFAMILY Galactose mutarotase-like 20 474 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian2g01571 494 PANTHER ALPHA-MANNOSIDASE 19 475 - -
Vian2g01571 494 MobiDBLite consensus disorder prediction 43 63 - -
Vian2g01571 494 FunFam Alpha-mannosidase 66 331 - -
Vian2g01571 494 Pfam Glycosyl hydrolases family 38 C-terminal domain 69 283 IPR011682 GO:0004559|GO:0006013
Vian2g01571 494 Gene3D - 350 476 - -
Vian2g01571 494 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 365 471 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01571 Vian-Chr2 32609858 32623885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01571 1 414 Glycoside Hydrolase AT3G26720 64.251 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01571 K01191 - gmx:100795651 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01571 2 32609858 32623885 Vian2g01571 2 32609858 32623885 ECH