Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01553 ATGGCTCTTCAAGGTTCAATGACTTTTGCTGCTTTCACCTTTTTCTTGCTCCTCACAACCCTCCCACACGAACCACATGCTTCAAGCCGTGGTTCCTTTGGCAGAAACATTAACCCTCCGGTTTCTGGTCTATGTTCCTCTTCTGTCATTGTGCATGGATACGAGTGCCAAGAACACGAGGTTACAACAAATGATGGATATATTCTGAGTGTGCAAAGGATCCCACAAGGTCGTGGTGGTAAGGGCAGCGGTAGCAGAACTAGCAAACAACCAGTAATCATACAACACGGAGTTCTAGTGGATGGTGTAACATGGCTTCTGAATTCTCCAGAGCAAGACCTACCTTTGATTTTAGCTGATAATGGCTTTGACGTGTGGATTGCAAACAGCAGAGGAACCAGATTTAGCCGCCGACACATCTCATTGGACCCCTCTAGTCCGGCCTTCTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATCTACCAGCTGTCTTTAATTATGTATTCAGCCAAACAGAGCAGAAGATCAATTACGTTGGCCACTCCTTGGGAACTTTGATAGCTTTAGCATCCTTTTCCGAAGGAACATTGGTTAACCAGCTGAACTCAGCAGCCTTGTTGAGCCCTATAGCTTATTTAAGCCACATGAACACAGCACTTGGTGTTATTGCTGCTAAGTCCTTCGTTGGTGAGGTCACTACCCTCTTCGGTCTGGCAGAATTTAATCCAAAAGGGTTACCTGTTGATGCCTTCCTTAAGTCTCTCTGCGTTTACCCTGGGATAGACTGCTATGACTTGATGACTGCACTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAACCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCCCAGACTGTAAGACGTGGGGTGTTGACAAAATTTAATTATGTGAGACCAGACTATAATATTATGCATTATGGAGAAATATTCCCTCCTATCTACAACCTTTCCAATATCCCTCATGACCTCCCTCTCTTCATTAGCTATGGTGGAAGAGATGCACTTTCAGATGCTCGTGATGTTGAGAATTTACTTGATAAACTCAAGTTTCATGATGAGGACAAGCTCAGTGTTCAGTTCATCGAGGAATATGCTCACGCCGACTATGTAATGGGGTTCAATGCCAAGGACTTGGTATACAATGCTGTTGTTTCATTTTTCAATCATCAAGTTAACACTTGA 1242 0.4356 MALQGSMTFAAFTFFLLLTTLPHEPHASSRGSFGRNINPPVSGLCSSSVIVHGYECQEHEVTTNDGYILSVQRIPQGRGGKGSGSRTSKQPVIIQHGVLVDGVTWLLNSPEQDLPLILADNGFDVWIANSRGTRFSRRHISLDPSSPAFWNWSWDELVSYDLPAVFNYVFSQTEQKINYVGHSLGTLIALASFSEGTLVNQLNSAALLSPIAYLSHMNTALGVIAAKSFVGEVTTLFGLAEFNPKGLPVDAFLKSLCVYPGIDCYDLMTALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQTVRRGVLTKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDARDVENLLDKLKFHDEDKLSVQFIEEYAHADYVMGFNAKDLVYNAVVSFFNHQVNT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01553 413 Gene3D alpha/beta hydrolase 35 409 IPR029058 -
Vian2g01553 413 FunFam Lipase 37 409 - -
Vian2g01553 413 PANTHER LYSOSOMAL ACID LIPASE-RELATED 47 409 - -
Vian2g01553 413 PIRSF Steryl_ester_lip 5 412 IPR025483 GO:0016788
Vian2g01553 413 Pfam Partial alpha/beta-hydrolase lipase region 50 108 IPR006693 GO:0006629
Vian2g01553 413 SUPERFAMILY alpha/beta-Hydrolases 52 408 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01553 Vian-Chr2 32203829 32208182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01553 40 413 Acyl Lipid Metabolism Gene Families AT2G15230 38.133 1.41e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01553 K01052 - gmx:100779460 729.554