Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01548 ATGACCAACAAAAAAGCATTATCTGTCTCAACCGTTGTTAGTGGCTTTTGTTTGGGTCATAGGGCGCAAAAGATGAGAGTTATGGAGTTACCACCCTCAGGTGACAACGGTTCTTCTACTAACGAAGATGAACCTGTACCTCAGGATGCAGATTATAGTATAAGTGACGAGCTGGAGACTTCAATCTTAGCAAGATTTCCAAGGTCACAGCTTTGGAAATTGTGCTTTATAAACAAGCGGTTCTTGGCGCTAGCGAGGAGTGGCGAGATCTACAAAATCAGGAGGCACTTGGGACTGAAAGAACCATCTGTGTTTATGTTAGCTAGTGGGGAGAGCAATTGGTGGGGAATGGAGTGGCCTTTCATGTCAAGCAAGAAGCTCCCTCCTATTCAATCAGATTATAATTTTGAGTGTGGAGACAAGGAGTCATTTTGTGCAGGATCCCACCTGCTTGTCTTTGGCAAGGAGATTGATGGGGCTGTAACTTGGAGGTTTGATTCAACCAATAATGAATGGCTCAAAGGGCCTTCTATGATCAACCCAAGGGGTCTTTTTGCATCAGCCACATCTGGTGCAATTGCTTTTGTTGCTGGGGGCTATGATGCAACAACTTACACCCAAATTTTGGATTCTGCTGAGATGTACAACTCTGAAAGCCAGAGTTGGAAACCTCTCCCAAGGATGAACAAAAGGAGGAAGTTTTGCTCAGGTTGCTTCATGGATAACAAGTTCTATGTCCTTGGAGGGAAAGATGAGGATGGGAGGGTCCTCACTTGCGGCGAATTCTTTGATGGGAAGACATGGAACTTGATTCCTGACATGTGGAAGGATATTCCTCTTATTGCTCATGATCAACCCTCTCCACCACTCCTTGCTGTTGTCAACAATGAGCTGTACACACTGGATGCTTCTTCAAATGAGCTGAAGGTCTATATGAAGGGAAGCAATTCATGGAAGACTTTGGGAGTGGTTCCTGTGAGAGCTGATGAACAAAGAGGTTGGGGTGTGGCTTTTAAATCTCTTGGTGACGAGTTGCTTGTGATTGGTGCACCTTCTGTGTCACAGGCAGAGCGAGTCTTGTGTATGTACACTGGTTGTCCTGATCCTGCTGATGACAAATTCAGGTGGAGGCAAATTGGATGTAGCACCATTCAGCTCAATCACTTTATCCGCAATTGTGCTGTGATGTGGACCTGA 1197 0.4528 MTNKKALSVSTVVSGFCLGHRAQKMRVMELPPSGDNGSSTNEDEPVPQDADYSISDELETSILARFPRSQLWKLCFINKRFLALARSGEIYKIRRHLGLKEPSVFMLASGESNWWGMEWPFMSSKKLPPIQSDYNFECGDKESFCAGSHLLVFGKEIDGAVTWRFDSTNNEWLKGPSMINPRGLFASATSGAIAFVAGGYDATTYTQILDSAEMYNSESQSWKPLPRMNKRRKFCSGCFMDNKFYVLGGKDEDGRVLTCGEFFDGKTWNLIPDMWKDIPLIAHDQPSPPLLAVVNNELYTLDASSNELKVYMKGSNSWKTLGVVPVRADEQRGWGVAFKSLGDELLVIGAPSVSQAERVLCMYTGCPDPADDKFRWRQIGCSTIQLNHFIRNCAVMWT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01548 398 SUPERFAMILY Kelch motif 143 368 IPR015915 GO:0005515
Vian2g01548 398 MobiDBLite consensus disorder prediction 29 50 - -
Vian2g01548 398 Gene3D - 93 381 IPR015915 GO:0005515
Vian2g01548 398 Pfam Kelch motif 231 274 IPR006652 GO:0005515
Vian2g01548 398 Pfam Kelch motif 181 229 IPR006652 GO:0005515
Vian2g01548 398 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 53 396 - -
Vian2g01548 398 SMART kelc_smart 149 192 IPR006652 GO:0005515
Vian2g01548 398 SMART kelc_smart 193 242 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01548 Vian-Chr2 32117985 32119181 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01548 - - gmx:100777338 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01548 2 32117985 32119181 Vian2g01548 2 32117985 32119181 ECH