Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01538 ATGAGGTACATCCTCCCTCGTCAAGAAGGAGACCGATCGGTTTGTGCCAACACCGATCGGCCAATAGCAGGAGTTTGGAAGCGAGCGAGCGGTTCAGACACATTAGCAGCAAATGATCAAGTGCAAGACCGAGCGATAAATCCCTCTCGGGAGAGGGGTAAAGCCCTCTCAAAGCCGAACGGTAAATCCTGTTCGCTAGGAAGCACTCCTAGCTCAAAGCAGAGAGGTAAAGCCCTCTCAAAGCTGAACGGTAAAGCCCGTTCCCTAGGAAGCACTCCTAGGTCAAAGACCGAGCGGTCGAGCGGTAAAACGCTCTCGGTTAATGTTGAAGGACGAGAGGTAAATCCCTCTCGGTTCATGTTGAAGGACGAGAGGACGAGAGGTAAATCCCTCTCGGTTCATGTTGAAGGACGAGCAGTAAATCCCTCTCGGTTAATGTTGAAGGTTGAGCGGACGAGCGGTAAATCCCTCTCGGTTAATGTTGAAGGTCGAGCGGTAAAACGCTCTCGGTTCATGTTGAAGGACGAGAGGACGAGAGGTAAACCCCTCTCGGTTCATGTTGAAGGACGAGCGGTACATCCTCCCTCGTCAAGAAGGAGACCGATCGGTTTGTACCAACACCGATCGGCCAATAACAAAAGTTTGGAAGCGAGCGAGCGGTTCAGACACATCAGCAGAAGAAGTTCAGTAGTGTCCATGGTGGTTAAGCGCAGCCCCAAGCGTCTCAAATACACCACTGGTTCTCGATTCACCAAGGAAGATGGATTGGTGTACACTGAAGCAGACCCATCTGCCTCTGATTCTTGGAAATTGGAACCGATTGTCAATCTCTTGAAACAAGGTGCGGTCGGAGTTATCCCCACTGATACCCTGTATGCAATAGTATGTGACCTTAGAAGCCACTCTGCCATTGAACGTCTTCGTAGAATCAAGAATATAGAAGCTTCAAAGCCTCTTAGCATCTTGTGTCATTCATTTCGGGACATAGACAAGTACACAGCTGGATTTCCACGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGCTGTTAAGCATCACTTACCTGGTCCTTACACATTCATCCTAATTGCAAGCAAAGAATTACCTAAGCAATGCATAAGGTTTGGGACGTCTTCTGCCAAATATGCATCAAGAAAAAATGTGGGTGTACGTATGCCTGATGATGCCATTTGTCAAACAATACTGAAGGAGATGGATGCGCCATTGATATGTACAAGCATCAAGTTCCAGAAGGAAGATGAATGGATGGTTGACCCAGTTATAATAGCTGATACATATGGACCAGAGGGTCTTGATTTTGTTGTTGATGGTGGTGTAAGAGTGGCCGACCCATCCACGGTTGTTGACATGACAAAAATGCCTCCCAAAGTACTACGACAGGGAAAGGGTCCTATTTTACATTGGATGGAATTTGAAGATGATCAGAAAACTGAGATCGATAAGGATCTCATCCCTGCCGGCATTTGA 1491 0.4735 MRYILPRQEGDRSVCANTDRPIAGVWKRASGSDTLAANDQVQDRAINPSRERGKALSKPNGKSCSLGSTPSSKQRGKALSKLNGKARSLGSTPRSKTERSSGKTLSVNVEGREVNPSRFMLKDERTRGKSLSVHVEGRAVNPSRLMLKVERTSGKSLSVNVEGRAVKRSRFMLKDERTRGKPLSVHVEGRAVHPPSSRRRPIGLYQHRSANNKSLEASERFRHISRRSSVVSMVVKRSPKRLKYTTGSRFTKEDGLVYTEADPSASDSWKLEPIVNLLKQGAVGVIPTDTLYAIVCDLRSHSAIERLRRIKNIEASKPLSILCHSFRDIDKYTAGFPRGDGQGHANLFKAVKHHLPGPYTFILIASKELPKQCIRFGTSSAKYASRKNVGVRMPDDAICQTILKEMDAPLICTSIKFQKEDEWMVDPVIIADTYGPEGLDFVVDGGVRVADPSTVVDMTKMPPKVLRQGKGPILHWMEFEDDQKTEIDKDLIPAGI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01538 496 MobiDBLite consensus disorder prediction 85 106 - -
Vian2g01538 496 ProSiteProfiles YrdC-like domain profile. 268 471 IPR006070 GO:0003725
Vian2g01538 496 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 220 488 - -
Vian2g01538 496 MobiDBLite consensus disorder prediction 182 201 - -
Vian2g01538 496 Pfam Telomere recombination 277 469 IPR006070 GO:0003725
Vian2g01538 496 NCBIfam L-threonylcarbamoyladenylate synthase 267 471 IPR006070 GO:0003725
Vian2g01538 496 Gene3D DHBP synthase 257 477 - -
Vian2g01538 496 SUPERFAMILY YrdC/RibB 262 472 IPR017945 -
Vian2g01538 496 MobiDBLite consensus disorder prediction 47 106 - -
Vian2g01538 496 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01538 Vian-Chr2 31959761 31974924 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01538 - - gmx:100789682 518.079