Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01508 ATGCCAGAGGAAGAAGTAGTTGAGCTCAAGTTCCGTCTCTACGATGGATCCGATATGGGACCCTTCCGTTACTCCCCTGCTTCCACCGTATCCGTGCTCAAGGACCGGATTTTTGCAGATTGGCCCAAAGACAAGAAAATTATACCAAAGTCAGCAAATGATATAAAACTGATAAGTGCTGGCAGAATTTTGGAGAACAACAGAACGGTTGGCCAGTGTAGAGTACCTTTAGGCGAGCTTCCCAAAGGAGTTATTATCACCATGCATGTTGTGGTCCAGCCACCTTTGCTTAAAGCAAAAACAGGAGGTCTTAAGACGGATTTTTATAAGCCATTTAGCTTAAGTGAAGATTATTATAATGTGAAACTCGAAGATTCCGAGAGCTTCACTTAA 393 0.43 MPEEEVVELKFRLYDGSDMGPFRYSPASTVSVLKDRIFADWPKDKKIIPKSANDIKLISAGRILENNRTVGQCRVPLGELPKGVIITMHVVVQPPLLKAKTGGLKTDFYKPFSLSEDYYNVKLEDSESFT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01508 130 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Vian2g01508 130 Gene3D - 1 101 - -
Vian2g01508 130 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Vian2g01508 130 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 101 IPR040015 -
Vian2g01508 130 CDD Ubl_MUBs_plant 7 95 - -
Vian2g01508 130 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 104 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01508 Vian-Chr2 31214926 31223771 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01508 - - gmx:100306698 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01508 2 31214926 31223771 Vian2g01508 2 31214926 31223771 ECH