Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01507 ATGCACTACCAAGCAGCTACTTCGTGGGGAAGCTACGTCACACCAAGGAACGCGGTGGTGGGAGATCCATTAGAACGCATAGAGAGGCTGGCGTCGGAAAATGCGGTCGTCATATTCAGTGTCAGCACATGCTGCATGTGTCACGCCATCAAGAGGCTCTTCTGTGGCATGGGGGTGAACCCAACGGTGCATGAGTTGGACGAGGACCCCAGAGGCAAGGACCTGGAACGAGCCTTGATGAGGTTACTAGGTTCTCCCTCTGTTGTTCCTGTCGTGTTCATTGGCGGCAAGCTTGTCGGAACCATGGACAGAGTCATGGCTTGCCACATCAATGGCACCCTTGTCCCTCTTCTGAAAGAAGCTGGTGCTCTCTGGCTCTAG 381 0.5459 MHYQAATSWGSYVTPRNAVVGDPLERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGSPSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01507 126 Gene3D Glutaredoxin 21 125 - -
Vian2g01507 126 FunFam Glutaredoxin family protein 24 125 - -
Vian2g01507 126 Pfam Glutaredoxin 36 99 IPR002109 -
Vian2g01507 126 PANTHER GLUTAREDOXIN 25 126 IPR011905 -
Vian2g01507 126 NCBIfam glutaredoxin-like family 27 126 IPR011905 -
Vian2g01507 126 CDD GRX_GRXh_1_2_like 35 117 - -
Vian2g01507 126 SUPERFAMILY Thioredoxin-like 24 125 IPR036249 -
Vian2g01507 126 ProSiteProfiles Glutaredoxin domain profile. 24 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01507 Vian-Chr2 31195567 31195947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01507 1 126 Miscellaneous Gene Families AT3G02000 64.234 6.24e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01507 K03676 - gmx:100818026 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01507 2 31195567 31195947 Vian2g01507 2 31195567 31195947 ECH