Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01506 ATGGGTAGCACATTTAATCCACAGATTTTAGTGGAAAAACTAGCCAAGCTGAATGGTTCACAAGCAAGCATAGAGACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCCAAACAGGTTGTTGAAACATGGGATAGGCAATTTCATGGTTCTCCACGTGAGAAGAGATTAGCATTTCTGTATCTCGCAAATGATATTTTACAGAACAGCAGGCGAAAAGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGACGTGATTCAAAATGGAGATGATTTTGCTAGGAATGCGGCACTTCGACTGATTGGTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTCAAGGAAGAGTTTGTTGGGAGGAATGTGGAAAACGCTAGTCGAGATGTGAAGCCTACAAACATGAAGAGGCCATCTGCAGGGAATGCATTGGAGAAAATAGTTTCAGCTTTCCATGTTGTTTATGGAGGGCAAAAAGATGAAGACGCCATATTGAGCAAATGCAGGAATGCCATTAACTGTCTTGATAAAGCAGATAAAGAAATAGTTTCAGGGCAATTTGGTGGATCGGCACTGGTAGATGAGCTCCAGGGGCATAATTCTGTACTGAAGGACTGCATTGAGCAGTTAACGGCCATAGAGTCATCAAGGACTAGTCTTGTGTCTCACTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCAAATGTTCGGTCAGATCGGGCATCCAACAACTGCCAACAGTTACTTAATGGCAATAACATTCAGTCGTTAGCTGAACAGAGCTCAAAGGAAATTCAAACCTCCATGTCATCTGCAAGTTTTAGTATTATTTCTAGTGAAGGGGAGCAATCTGCTCCATTGATGTACACCCCACAAGCGTCATTTTCTCAGAAATCTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCAGCAGTGGCAGCAAAATTGACCGCTTCAACATCCTCCGCGCAGATGCTATCATATGTGCTGTCCTCCCTAGCATCAGAAGGTGTAATAGGTAATCAGTCAGCAGCCGATTATCACTCGGAGAAGAGGACCAAGCTCGAGAATGACCAACCATCTTTTATGCCATCTCAGAATCCTCAACAACCACTGCCTCCCTTTTCTCTACCTGATTCTATTCAACACAATGCTCCTACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCATCACCTCCTCCATTGCCACCACCGCCACCACCACCAATGTCACAGTACCCAGTGCCACAGTTTATGCAGACTGCTGGATCTATTAGTAGTATGGCATACAGCTATGGAATGACACAACAGCCGACAATGACAGCCTATCCCGGTGTCGGTGCTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAAGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1545 0.4466 MGSTFNPQILVEKLAKLNGSQASIETLSHWCIFHMNKAKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIGIWEERKVFGSRGQILKEEFVGRNVENASRDVKPTNMKRPSAGNALEKIVSAFHVVYGGQKDEDAILSKCRNAINCLDKADKEIVSGQFGGSALVDELQGHNSVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAANVRSDRASNNCQQLLNGNNIQSLAEQSSKEIQTSMSSASFSIISSEGEQSAPLMYTPQASFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSAADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPDSIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPPMSQYPVPQFMQTAGSISSMAYSYGMTQQPTMTAYPGVGASTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01506 514 MobiDBLite consensus disorder prediction 368 449 - -
Vian2g01506 514 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 494 - -
Vian2g01506 514 SMART 558neu5 9 130 IPR006569 -
Vian2g01506 514 Pfam CID domain 9 120 IPR006569 -
Vian2g01506 514 MobiDBLite consensus disorder prediction 483 514 - -
Vian2g01506 514 CDD CID_RPRD_like 7 128 - -
Vian2g01506 514 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Vian2g01506 514 MobiDBLite consensus disorder prediction 416 444 - -
Vian2g01506 514 MobiDBLite consensus disorder prediction 476 514 - -
Vian2g01506 514 MobiDBLite consensus disorder prediction 400 415 - -
Vian2g01506 514 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Vian2g01506 514 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Vian2g01506 514 Gene3D - 2 129 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01506 Vian-Chr2 31151107 31170765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01506 K15559 - gmx:100806108 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01506 2 31151107 31170765 Vian2g01506 2 31151107 31170765 ECH