Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01484 ATGATGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGATTATGTGGTTTCACACCGTGACCGGAACGCTTTGTCTTTGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTGTACGAGGCAGAGGGTGTTCATAGGGAACTGTTACTCTATCTCTCCAGAGAGGTTGATCCAAAGGTTTCCTGGTCTCAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTTCCTTACGGGTGGGGTGGTTTTGTGTGTCCATGGATTGAGGCTCTGGCCAAGAGCAGAGTTGGGTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACAAACTTTAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCCACCGATGGCCTTGCTGCCGTAGCTGCTAATTGCAGCCATGCAGCAAAGGTCCCGGAGGATCTTGGGAGCTTGACTGATCTGTATCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAAGATCACAAAGGGCAGTGGCTAAGTTGCTTTCCTGATAGCTGCACATCGCTTGTCTCTCTGAATTTCGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCTCTAGAGAGACTTGTGGCCAGGTCTCCTAACCTCAAGAGTTTGAAGCTGAATCGTTCAGTTCCCCTTGATGCCCTGCAAAGGATAATGACACGAGCACCTCAACTAGCGGATTTGGGAATTGGATCGTTTGTCCAAGATCCTGAATCAGAGGCATTCATAAAGCTCAAGAACACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCAGGACTTTTGGAAGTTGCTCCTCACTGTCTTGCTGCGATATTTCCCATTTGCCCCAATTTAACATCCTTAAACTTGAGCTATGCAGCAGGCATTCAGGGCAGTGATCTGATAAAACTAATTCGCCACTGTGTGAAACTACAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTTGGTGTTGTAGCCAAGACATGTACAGATTTGCAAGAACTGAGGGTGTTTCCATCCGTTCCCTTTGGAAATGCATTGGCTGTCACAGAAGTGGGACTTGTTGCAATATCAGTGGGGTGCCCCAAGCTTCATTCATTGCTCTACTTCTGCCACCAGATGACAAATGCTGCACTGATTACAGTGGCCAAGAACTGCCCCAATTTCATCCGCTTCAGGTTATGCATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCGCTGGACGAAGGTTTTGGTGCAATTGTGCAGTCTTGCCGGCGACTGAGGCGGCTATCACTCTCAGGGAAGTTGACAGACCAGGTTTTCCTTTACATTGGAATGTATGCTGAGAAGCTTGAAATGCTGTCTATTGCATTTGCTGGAGACAGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAAATGAGGAAGCTTGAGATAAGAGATTGCCCTTTTGGTGACTTGGCACTTCTGACAGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACTGTGGGAGCCTGCAAGTTGCTGGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAGTGAGCAAGAAGATTGCATCTTGGAAGATGGGCAAAGGGTAGAGAAAATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTCTAG 1764 0.4649 MMNYFPDEVIEHIFDYVVSHRDRNALSLVCKSWYRIERCTRQRVFIGNCYSISPERLIQRFPGLKSLTLKGKPHFADFSLVPYGWGGFVCPWIEALAKSRVGLEELRLKRMVVSDESLELLSRSFTNFKSLVLVSCEGFSTDGLAAVAANCSHAAKVPEDLGSLTDLYLRELDLQENEVEDHKGQWLSCFPDSCTSLVSLNFACLKGEVSLGALERLVARSPNLKSLKLNRSVPLDALQRIMTRAPQLADLGIGSFVQDPESEAFIKLKNTILKCKSITSLSGLLEVAPHCLAAIFPICPNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLWIMDCIGDKGLGVVAKTCTDLQELRVFPSVPFGNALAVTEVGLVAISVGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGKLTDQVFLYIGMYAEKLEMLSIAFAGDSDKGMLYVLNGCKKMRKLEIRDCPFGDLALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNESEQEDCILEDGQRVEKMYLYRTLAGKRKDAPEYVWTL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01484 587 Gene3D - 1 41 - -
Vian2g01484 587 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
Vian2g01484 587 Gene3D Ribonuclease Inhibitor 42 587 IPR032675 -
Vian2g01484 587 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 93 546 - -
Vian2g01484 587 FunFam Transport inhibitor response 1 42 587 - -
Vian2g01484 587 Pfam F-box 3 42 IPR041567 -
Vian2g01484 587 SMART LRR_CC_2 381 405 IPR006553 -
Vian2g01484 587 SMART LRR_CC_2 490 515 IPR006553 -
Vian2g01484 587 SMART LRR_CC_2 100 124 IPR006553 -
Vian2g01484 587 SMART LRR_CC_2 125 150 IPR006553 -
Vian2g01484 587 SMART LRR_CC_2 441 464 IPR006553 -
Vian2g01484 587 SMART LRR_CC_2 299 324 IPR006553 -
Vian2g01484 587 CDD F-box_AtTIR1-like 2 41 - -
Vian2g01484 587 FunFam Transport inhibitor response 1 1 41 - -
Vian2g01484 587 SUPERFAMILY RNI-like 17 547 - -
Vian2g01484 587 SMART fbox_2 5 44 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01484 Vian-Chr2 30796589 30799019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01484 - - gmx:100812516 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01484 2 30796589 30799019 Vian2g01484 2 30796589 30799019 ECH