Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01476 ATGAGCAGTTGGAAAAACCTTCTTCTACGAATCGGTGACAAGAGTCCCGAATACGGAGTCTCCTCTGACTATAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGTCGCGAACTTGACCACTCCCATACCGATGTTTTGGAGTTCCTTCTCACGTGTGCTGAACATTTGCCTCACAAGATTCCTCTGTATGGAACCCTGATTGGCTTGATTAACTTGGAAAATGAGGACTTTGGGAAGCAACTAGTGGAGAAAACTAAAACCATGTTTCAGGATGCCTTGGATACTGGAAACTGCAATGGGGTTCGAGTTCTAATGCGGCTTTTGACTGTTATGATGTGCAGTAAGGTTCTTCAACCCAGCTCCTTGGTGGCTGTCTTTGAAACATTTTTATCCTTAGCTGCCACAACAGTAGATGAGGAAAAAGGCAATCCCTTATGGCAGCCTTGTGCAGACTTTTACATCACTTGCATTTTATCATGCCTTCCATGGGGCGGAGCAGAACTTACTGAGCAAGTTCCTGAAGATATTGATAGAGTGATGGTCGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATCTGATACTGGCTTATCCTTTTTTGAGAATGATGATGAAAATGGGGAAGGTATTAGTGACAAGGATTTTTTAGAAGATTTATGGGATAGAATACAGGCTCTATCAACGAGGGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAATTGGTTGCTGGGAAGTCTCATGAATTTGGGCCAATAAGCTGCCCCAGCCTACCAGAACCACCTTCAGTCCCTTCTGGCGTGTCTACTGGTAAACAGAAGCATGAAGCTGAATTAAAATATCCACAAAGGATACACCGGTTAAATATATTTCCTCCCAGTAAACATGAGGATATACAACCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTCAATGGCTGTCGAAAGGAGTGTGCATCTTTCATGGTTGGTTTGCCTGTTTCCTTCAGATATGAGTACCTCATGGCCGAGACAATATTCTCTCAGTTGCTGATGCTACCTCAACCACCTTTCAGACCAGTATATTACACACTTGTAATTATTGACCTTTGCAAGGCTCTTCCTGGAGCTTTTCCTGCTGTTGTTGCTGGAGCAGTTCGTACTCTCTTTGAGAGGATAGCTGATTTGGATATGGAATGCCGAACACGTCTAATCCTTTGGTTCTCCCACCATTTATCAAACTTCCAGTTTATCTGGCCATGGGAAGAGTGGGCTTATGTCCTAGAGCTCCCAAAGTGGGCTCCACAACGTGTCTTTGTCCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCACCTCGTTTGGAAGAATTGCTTCCTCCTAAAAGCGGGCCAAATTTTAGTTTTGGTTCAGAAGATGGTAAAGAAAGCAATGAGCATGCACTGTCTGGAAAGCTCAACGGCATGGTTAAAGGGAAGTCACCTGTCCGTGAAATAATCTCTTGGATTGATGAAAGTGTGCTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGATTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACGCATTTGATAACTGTCTTGGAGAGATATGCACAAGTCTTTGCGAAAGTATGTCCGGATGAGGATCGACAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGACTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATACATCGGATCGTCCATGGGAGATTCTGAGAAATGCAGTAAGCAAGACACATAATCGTATTTCTGATTTACGGAAAGAAATATTAACTATTAAAAAGAACATTTCATCTGCCGAAGAAGCTGCCAAGGAGGCAAAAGCTGAGCTAGATGCTGCAGAGTCAAAACTTACACTTGTGGATGGTGAACCAGTTCTTGGTGACAATCCTGTTAGATTGAATAGATTGAAATCACATGCTGAAAAGGCAACGGAGGACGTGCTGACTGTTAAAGAATCCTTAGAATCTAAGGAAGCTCTTCTTGTCCGAGCAATTGAGGAAAATGAGGCATTATTTCTCTTGTTGTACAAAAGCTTCTCAAATGTGTTGACAGAGCGGCTTCCTGAAGGAACTAGAACACTGCATGAGTTGAAGTCTGTGCAAGTAGATGTGATGGCAGTGGACGCTGAAGAGCCACCAACAATGGAATTAGATGACGAAAACCAGAGATCTCAAAACAGTCAGTCAAATGGAGAGAAGAAAGGTGGTGCTTATGTTGTAGGTGAAAAGGAGCAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCTTTTTCTAGGCAGTATGCTGCTGAGATATGGCCCCATGTTGAAAAGTTGGATGCAGAGGTATTGACAGAAGAAACACCTTATCTTTTTAGGTCAGCTGTTTATACTGGTCTTCGAAGACCGATTCACGAGGCATGA 2589 0.4276 MSSWKNLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDHSHTDVLEFLLTCAEHLPHKIPLYGTLIGLINLENEDFGKQLVEKTKTMFQDALDTGNCNGVRVLMRLLTVMMCSKVLQPSSLVAVFETFLSLAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELTEQVPEDIDRVMVGVEAYLSIRKHTSDTGLSFFENDDENGEGISDKDFLEDLWDRIQALSTRGWKVESVPRPHLSFEAQLVAGKSHEFGPISCPSLPEPPSVPSGVSTGKQKHEAELKYPQRIHRLNIFPPSKHEDIQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFRPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPKSGPNFSFGSEDGKESNEHALSGKLNGMVKGKSPVREIISWIDESVLPNNGLEVTLRVIVQTLLNIGSKSFTHLITVLERYAQVFAKVCPDEDRQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIKKNISSAEEAAKEAKAELDAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKATEDVLTVKESLESKEALLVRAIEENEALFLLLYKSFSNVLTERLPEGTRTLHELKSVQVDVMAVDAEEPPTMELDDENQRSQNSQSNGEKKGGAYVVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEETPYLFRSAVYTGLRRPIHEA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01476 862 MobiDBLite consensus disorder prediction 781 795 - -
Vian2g01476 862 SUPERFAMILY ARM repeat 478 845 IPR016024 -
Vian2g01476 862 SMART if4_15 8 229 IPR003890 GO:0003723|GO:0005515
Vian2g01476 862 Gene3D - 3 269 - -
Vian2g01476 862 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Vian2g01476 862 Pfam MIF4G like 498 826 IPR015174 GO:0016070
Vian2g01476 862 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Vian2g01476 862 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Vian2g01476 862 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Vian2g01476 862 Pfam MIF4G domain 21 199 IPR003890 GO:0003723|GO:0005515
Vian2g01476 862 Gene3D - 490 847 - -
Vian2g01476 862 Coils Coil 644 685 - -
Vian2g01476 862 PANTHER CAP BINDING PROTEIN 3 851 IPR027159 GO:0000339|GO:0005846|GO:0006406
Vian2g01476 862 FunFam Nuclear cap-binding protein 296 481 - -
Vian2g01476 862 Gene3D - 299 481 - -
Vian2g01476 862 MobiDBLite consensus disorder prediction 773 797 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01476 K12882 - gmx:100811738 1567.75