Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01468 ATGAGGCAGTACAAGCAGGTTTCAGCCCTTAACCGGCGACCCACCGTCCTTTATCTGGTGTGCGCGGTTGCATTGTTCTCCCTCCTCCTCTTCTACATCCAATCCTCTCTCTTCGCAGGGTCCCTTTCTTCGGCTCGCAAATCCGAAATTATCCGCGTCTTGTCTAACTTTCAGTCCAGTGTTCAGCAATGTGTGGATAAGAGGGGGCTAGGACTCACTGCTCATATAATTGACCATTGTAATTTGATCCTTAAATACCCTGAAGGTACCAACAGCTCTTGGTACAACGCACAGTTTAAGCACTTTGAGCCGTTGGAGTACAAATATGATGTGTGTGAGGCAATCCTGTTGTGGGAACAGTATCGGAACATAACAACTGTGTTGACCAGAGAGTATCTTGATTCTCGACCTGGTGGTTGGATGGATTACGCTCCACAAAGGATAGCACAGTTGGGGACAAAGAAGTGCAGCAACAAGACTCTTTGTGAAGAGAACCTCAATGTGTTATTACCTGCAAAGCCCCCATTTCACCCACGACAGTTCCGAACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACTACATTTGGGAAAGAAATTGATAGCCATGATGCTGTTATTCGGGAGAATGAGGCCCCTGTTAATGAGGAATATGCCAAATATGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTCAGAGGTGCTGCGCGTAACATGGTCCCTATTCTAAACGGATCTGGTAGTGACAAGACAACTGCGGACAACAGCAAAGGGCACCGGACAGATGCGAACGACAATGACAATGCTGACACTGAGGTTCTCATAATCAAAAGTCTGACACACAGAGAAATCAATGCAGTTATAAAGACCATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCGCTCTCCATGTGTGATATCATTGATATATATGGATTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTAAGCCTAGGAAGGGACACAATCCACTTCAAGGAAGAGCGTATTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCGCCCATGAGATCTAAGAGGAGGGAAGACTGGTCAGATATACCTGGTAGAGAAATGATAAGGCAAGCACATGCAGCAGCTTTGCGCTTGAAAAGGAATGAAGACGATCATGGAGGTGATTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTGGATCCAGAGAACAGTGGACCTGTTTCAGGATCACCAGACATGAGTGATGTCAGGAAATATTCAAATTATAGTAAATGGGAAGTGATACCTTTTGAGAGTTTGAGGAGGGAAGCACAGGATCATTATAACCAGATGCAAGGGGTCTCTCTATATAAAATGGACGGCAATAGGTTGGATGATCTAGTCTGTGTGAGACATTCCTCAAAATCTGATGCGTAA 1497 0.4496 MRQYKQVSALNRRPTVLYLVCAVALFSLLLFYIQSSLFAGSLSSARKSEIIRVLSNFQSSVQQCVDKRGLGLTAHIIDHCNLILKYPEGTNSSWYNAQFKHFEPLEYKYDVCEAILLWEQYRNITTVLTREYLDSRPGGWMDYAPQRIAQLGTKKCSNKTLCEENLNVLLPAKPPFHPRQFRTCAVVGNSGDLLKTTFGKEIDSHDAVIRENEAPVNEEYAKYVGLKRDFRLVVRGAARNMVPILNGSGSDKTTADNSKGHRTDANDNDNADTEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSKPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRREDWSDIPGREMIRQAHAAALRLKRNEDDHGGDLGQFGNCKVWGNVDPENSGPVSGSPDMSDVRKYSNYSKWEVIPFESLRREAQDHYNQMQGVSLYKMDGNRLDDLVCVRHSSKSDA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01468 498 MobiDBLite consensus disorder prediction 245 268 - -
Vian2g01468 498 Gene3D Glycosyl transferase family 29 142 375 IPR038578 -
Vian2g01468 498 Pfam Glycosyltransferase family 29 (sialyltransferase) 163 349 IPR001675 GO:0006486|GO:0008373
Vian2g01468 498 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 1 497 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01468 Vian-Chr2 30537459 30550064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01468 68 369 Glycosyltransferase AT1G08660 79.470 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01468 - - vra:106759327 929.472