Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01373 ATGGAGAACGGCCTCTACGATGAGTTGTTGCAAGAAATTTTCCAGAAACTCCCTCCTTCTTCCTCCTCCTCCGTCGCCCTCGTCTGCAAGCGCTGGCTCCGCCTCTACCGATCCTCCACAACCTCCCTCTCCCTCCGCCTCATCCCTCACTCCTCTCTCACCGTCTCTTCTCTCTCCTCCTTCCTCTTCCACCACCCTTTCCTCTCCTCCCTCTCTCTCTCCCTCTCTCCACACTTCTCTCTGTCCCCACACATCCTCTCACTCATCTCCTCCTCCTGCTCCAACCTCCTCGCTCTTTCTCTCGACCCCACCCCTCTTTCTCTCTCCTCCCTCCTTTTTCTCTCCACCTCCTTTCCCCGTCTCACATCCCTCTGCATCACCCTCCCCAGGCCCCTATTTCTCAACTGGGTTCCCTCCTTCCCCTGTCTCAAACAATTGTCCATTTCCCTGTCCTCTGACCAAGAAAATCCAGGTGGGGTCAACAGCGACGAAGAAAGGGAAGACTTTGACGCGGAATTGGGGTTGGAGAGTCTTTGTGTGGTGGGGATTCGCAGCAATGATTGGGGGCTGGGCTGGTTGTGGAGGAGATGCACCAAGCTTAAGAAATTGAAGCTTCACAGTTGCCAGGGTATTGGAGGGCCTTACTCGTCTTTCGTCAGGTGCTTGCAAGGAATTCATGAAATTGAGCTCAGAACTTGCAGGAGTGTGGTGTACGCGGTTCTTTTGGAGCTTGTGGAACATTGTCACTCCCTAGATTTTCTCTTGGTTCATGATGGTGGTAGCAGAGAAGGACTGATGCAATTTTTAACTCAGGGCCGCTCCAATGTTTGCAAATTCGACCTCCGTCTCCCTCTGGACCTCAACAACGACCATCTCTTAGCGATGGCCGCGAACTTCAATAAGCTCACAAGTCTCAGGCTTCAAAGCTGTTGCCTTGTTACCGGGCAGGGCCTAAAGGTTCTTGCCGGAGCTTGCGGCGGACTTGAGGAACTGGCCCTGGTGAACTGTGACGTGGTTGAGAGGGAGCCTGGGCTGCTTGCGACTCTGGGACAGCATTTGAGGCAGTTGAGGAAGCTGGACTTGTCTCATAACGAAATGTTGGTCGACAAGGAGTTTGTTTCGATGCTGGTTTCGTGCATTCGTTTGATTGATTTGAGAGTGAGAGGGTGTAAAGCACTTACTAGTGTTGCTGTGGTTTCTATGCTTAGGAGCTGCAAGCACCTTCAAAATGTGGATATTATGCACTGTTTCCGTATAGACTCTGAGGCGATTGAGCTGTTTGTTAAGAATTCTTCTCGGTTGAGGAAAATGGAAGTTGAGAGCAGCAAGCTCTCTGATGCTGCGAAAACGTGGGCATCGAGTAAGTTTATTGAAGTTGAGTGA 1383 0.5148 MENGLYDELLQEIFQKLPPSSSSSVALVCKRWLRLYRSSTTSLSLRLIPHSSLTVSSLSSFLFHHPFLSSLSLSLSPHFSLSPHILSLISSSCSNLLALSLDPTPLSLSSLLFLSTSFPRLTSLCITLPRPLFLNWVPSFPCLKQLSISLSSDQENPGGVNSDEEREDFDAELGLESLCVVGIRSNDWGLGWLWRRCTKLKKLKLHSCQGIGGPYSSFVRCLQGIHEIELRTCRSVVYAVLLELVEHCHSLDFLLVHDGGSREGLMQFLTQGRSNVCKFDLRLPLDLNNDHLLAMAANFNKLTSLRLQSCCLVTGQGLKVLAGACGGLEELALVNCDVVEREPGLLATLGQHLRQLRKLDLSHNEMLVDKEFVSMLVSCIRLIDLRVRGCKALTSVAVVSMLRSCKHLQNVDIMHCFRIDSEAIELFVKNSSRLRKMEVESSKLSDAAKTWASSKFIEVE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01373 460 SUPERFAMILY F-box domain 7 66 IPR036047 GO:0005515
Vian2g01373 460 SUPERFAMILY RNI-like 186 448 - -
Vian2g01373 460 PANTHER UNCHARACTERIZED 6 443 - -
Vian2g01373 460 Pfam Leucine Rich repeat 301 322 IPR001611 GO:0005515
Vian2g01373 460 SMART LRR_CC_2 353 378 IPR006553 -
Vian2g01373 460 SMART LRR_CC_2 405 430 IPR006553 -
Vian2g01373 460 SMART LRR_CC_2 379 404 IPR006553 -
Vian2g01373 460 SMART LRR_CC_2 197 224 IPR006553 -
Vian2g01373 460 SMART LRR_CC_2 299 324 IPR006553 -
Vian2g01373 460 Pfam F-box-like 7 36 IPR001810 GO:0005515
Vian2g01373 460 Gene3D Ribonuclease Inhibitor 8 459 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01373 K10268 - gmx:100798590 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01373 2 28226336 28227718 Vian2g01373 2 28226336 28227718 ECH