Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01368 ATGGCAACTCAAACACCAGTTGAAAACAATTATCTCAAAAACGCTACTGAAGAAGAATTGCAGAGGCAGAAGGCAATTGATGATTGGCTTCCAATTACTTCTTCAAGGAATGCAAAATGGTGGTACTCTGCCTTCCACAATGTCACTGCCATGGTTGGGGCTGGTGTTCTCAGTCTCCCCTATGCCATGTCTGAGCTAGGATGGGGTCCTGGTGTAACTGTGCTTGTTCTGTCATGGATCATCACCCTTTACACTCTGTGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGCAAACGTTTTGACAGATACCATGAACTAGGGCAGTATGCCTTTGGGGAAAAGCTAGGACTTTATATTGTGGTGCCTCAACAGCTTGTGGTTGAAATTGGGGTGAACATTGTCTATATGGTCACTGGAGGGAAATCCTTGCAGAAATTCCATGACACTGTGTGTGATAGCTGCAAAAAGATCAAGTTGACCTTCTTCATTATGATCTTTGCATCTGTTCACTTTGTATTGTCTCACCTGCCTAACTTCAACTCCATTTCTGGTGTATCTTTGGCAGCAGCAGTTATGTCCTTGAGTTACTCTACCATTGCTTGGACAGCTTCTGCTAACAAGGGTGTTCAAGAAGATGTACAATATGGTTACAAAGCTAAGAGTACAGTGGGAACAGTGTTTAATTTCTTTAGTGCCCTTGGTGATGTTGCTTTTGCCTACGCTGGACACAATGTGGTGTTGGAAATCCAAGCAACAATTCCATCTACTCCAGAGAAACCATCCAAGGGTCCTATGTGGAAAGGAGTGATTGTTGCTTACATAGTTGTGGCTCTGTGCTACTTCCCAGTTGCCCTTGTTGGTTACTGGATGTTTGGAAATGGGGTTCAAGACAACATTCTCATGAGTCTAGAGAAACCAAAATGGCTTATTGCAACGGCTAACATGTTTGTTGTCATACATGTTATTGGAAGTTATCAGATTTATGCAATGCCAGTGTTTGACATGATCGAAACTTTGTTGGTGAAGAAGTTGAACTTCAAACCTAGTATAGTGCTTCGCTTTATTGTACGCAATTTATACGTGGCATTCACAATGTTCGTTGCTATTACCTTCCCATTCTTTGGTGGTCTCCTAGGATTTTTCGGAGGATTTGCTTTTGCACCTACAACATACTTCCTCCCTTGTATCATGTGGCTTGCAATCTACAAACCAAGGAGATTCAGCTTGTCTTGGTTGACCAACTGGATCTGCATTGTGCTTGGCCTAATGTTGATGATTTTATCACCAATTGGAGGATTGAGGTCAATTATAATTGATGCCAAGAACTACCACTTCTACTCATAA 1347 0.4217 MATQTPVENNYLKNATEEELQRQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLVVEIGVNIVYMVTGGKSLQKFHDTVCDSCKKIKLTFFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWTASANKGVQEDVQYGYKAKSTVGTVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVIVAYIVVALCYFPVALVGYWMFGNGVQDNILMSLEKPKWLIATANMFVVIHVIGSYQIYAMPVFDMIETLLVKKLNFKPSIVLRFIVRNLYVAFTMFVAITFPFFGGLLGFFGGFAFAPTTYFLPCIMWLAIYKPRRFSLSWLTNWICIVLGLMLMILSPIGGLRSIIIDAKNYHFYS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01368 448 Pfam Transmembrane amino acid transporter protein 37 432 IPR013057 -
Vian2g01368 448 FunFam Lysine histidine transporter 1 33 443 - -
Vian2g01368 448 PANTHER OS05G0424000 PROTEIN-RELATED 38 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01368 Vian-Chr2 28127753 28133772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01368 6 448 Organic Solute Cotransporters AT1G48640 78.781 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01368 K26385 - gmx:100791368 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01368 2 28127753 28133772 Vian2g01368 2 28127753 28133772 ECH