Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01367 ATGGGAACCGAAACTCCAACTACTCAAAAGTTTCATTCCTCAGAACTTGAGATTGATAATAAGAGAACTGCGGAGCAGAAAGCAATCGATGATTGGCTTCCCATAACTTCTTCAAGGAACGCAAAATGGTGGTACTCAGCTTTTCACAACGTCACTGCCATGGTAGGAGCTGGAGTTCTCAGCCTTCCTTCTGCCATGGCAAATCTTGGATGGGGTCCTGGTGTGGTTATTCTTGTGCTGTCATGGATTATCACTCTGTACACACTGTGGCAAATGGTTGAGATGCATGAGATGGTGCCTGGGAAAAGGTTTGACAGGTACCATGAACTGGGGCAGCATGCGTTTGGGGAAAAGCTGGGACTGTGGATTGTGGTGCCTCAGCAACTGATATGTGAGATTAGTGTGGACATTGTGTACATGGTCACTGGAGGAAAATCACTGCAGAAAATTCATGATCTTGTCTGCAAAAATAACTGCAATAACATGAAGACCACTTACTTCATCATCATCTTTGGCTCTGTTCATTTTGTTCTCTCTCACCTTCCCAACTTCAATGCCATCTCTGGCATATCTTTGGCTGCCGCAATCATGTCTCTCAGCTACTCAACGATTGCATGGGTGGCTTCGGTGGAGAAGCATGTTGGAAATCCTCACAAAGAGGTGGAATATGGGTACAAGGCGAGCACATCAGCAGGAACATTTTTCAACTTTCTGAATGCCTTGGGTGATGTGGCTTTTGCCTATGCTGGACACAATGTGGTGTTGGAGATTCAAGCAACCATCCCATCAACCCCTGAGAAGCCTTCAAAGCGTCCCATGTGGTGGGGAGTTTTGGTGGCCTACTCAGTTGTCGCCTTGTGCTACTTCCCTGTTGCTCTCATTGGCTATTGGGTCTTTGGCAACTCTGTTGATGACAACATTCTCATCTCCCTCAACAAACCCACTTGGCTCATAGTAACTGCTAACATGTTTGTCGTCATCCATGTCATAGGAAGCTACCAGCTATATGCAATGCCGGTTTTTGACATGATTGAAACAGTGATGGTCAAACAATTGCGTTTCAAGCCAAGCTGGTGGCTACGATTTGTGGAGCGCAATGTTTATGTTGCATTTACATTGTTTGTGGCCATCACTTTCCCTTTCTTCGGTTCCCTTCTCGGATTTTTTGGAGGATTCGCATTTGCCCCAACAACATACTTTCTCCCCTGTATTATGTGGCTTGCTATTTACAAACCTAGGAAGTTCAGCTTATCCTGGATCACCAACTGGATTTGCATTATACTTGGCTTCCTACTGATGATTCTGGCACCAATCGGCGGATTAAGGAGTATCATACTCAATGCCAAGACCTATGGGTTTTACCAGTGA 1368 0.4539 MGTETPTTQKFHSSELEIDNKRTAEQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPSAMANLGWGPGVVILVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLICEISVDIVYMVTGGKSLQKIHDLVCKNNCNNMKTTYFIIIFGSVHFVLSHLPNFNAISGISLAAAIMSLSYSTIAWVASVEKHVGNPHKEVEYGYKASTSAGTFFNFLNALGDVAFAYAGHNVVLEIQATIPSTPEKPSKRPMWWGVLVAYSVVALCYFPVALIGYWVFGNSVDDNILISLNKPTWLIVTANMFVVIHVIGSYQLYAMPVFDMIETVMVKQLRFKPSWWLRFVERNVYVAFTLFVAITFPFFGSLLGFFGGFAFAPTTYFLPCIMWLAIYKPRKFSLSWITNWICIILGFLLMILAPIGGLRSIILNAKTYGFYQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01367 455 Pfam Transmembrane amino acid transporter protein 40 438 IPR013057 -
Vian2g01367 455 Gene3D Amino acid/polyamine transporter I 36 453 - -
Vian2g01367 455 PANTHER OS05G0424000 PROTEIN-RELATED 36 440 - -
Vian2g01367 455 FunFam Lysine histidine transporter 1 36 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01367 Vian-Chr2 28096847 28105018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01367 13 455 Organic Solute Cotransporters AT1G24400 75.169 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01367 K26385 - gmx:100790838 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01367 2 28096847 28105018 Vian2g01367 2 28096847 28105018 ECH